RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PHACTR2O75167 634 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 KLKB1P03952 638 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 NR3C1P04150 777 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 TRIM49P0CI25 452 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 TRIM49CP0CI26 452 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 CEACAM1P13688 526 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 PFKFB1P16118 471 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 ADORA2BP29275 332 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 RPIAP49247 311 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
TPM3-201ENST00000271850 ANO4Q32M45 955 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 UAP1L1Q3KQV9 507 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 EOGTQ5NDL2 527 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 C10orf76Q5T2E6 689 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 SLC23A3Q6PIS1 610 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 UNQ6494/PRO21346Q6UXR6 183 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 TPGS1Q6ZTW0 290 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 LPCAT2Q7L5N7 544 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 C11orf74Q86VG3 221 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 SYT12Q8IV01 421 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 RBBP8NLQ8NC74 664 aaPredicted RBP9.45□□□□□ -0.9
TPM3-201ENST00000271850 CCDC26Q8TAB7 109 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 TAS1R2Q8TE23 839 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 TNIP3Q96KP6 325 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 HNRNPABQ99729 332 aaKnown RBP9.45□□□□□ -0.9
TPM3-201ENST00000271850 GABRG3Q99928 467 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 SCNM1Q9BWG6 230 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.45□□□□□ -0.9
TPM3-201ENST00000271850 COMMD8Q9NX08 183 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 FBXO10Q9UK96 956 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 ZMIZ1Q9ULJ6 1067 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 CLEC4EQ9ULY5 219 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 SCML2Q9UQR0 700 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 SH3BP1Q9Y3L3 701 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
TPM3-201ENST00000271850 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.44□□□□□ -0.9
TPM3-201ENST00000271850 PDXKO00764 312 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 CILPO75339 1184 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 GJB3O75712 270 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 ALDH1A2O94788 518 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 AVPP01185 164 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 CAPNS1P04632 268 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 HOXB2P14652 356 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 TYRP14679 529 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 MAPK8P45983 427 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 ME1P48163 572 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 KIF11P52732 1056 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 AP3M2P53677 418 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 SEMA3BQ13214 749 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 ZCWPW2Q504Y3 356 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 DAB2IPQ5VWQ8 1189 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 LYSMD4Q5XG99 296 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 BHLHA9Q7RTU4 235 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 UNC93AQ86WB7 457 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 KDF1Q8NAX2 398 aaPredicted RBP9.44□□□□□ -0.9
TPM3-201ENST00000271850 IPO4Q8TEX9 1081 aaKnown RBP9.44□□□□□ -0.9
TPM3-201ENST00000271850 SEMA4DQ92854 862 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 JAKMIP2Q96AA8 810 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
TPM3-201ENST00000271850 DNAJC17Q9NVM6 304 aaKnown RBP9.44□□□□□ -0.9
TPM3-201ENST00000271850 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 PLK2Q9NYY3 685 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 BCCIPQ9P287 314 aaKnown RBP eCLIP9.44□□□□□ -0.9
TPM3-201ENST00000271850 DEC1Q9P2X7 70 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 TRAF3IP3Q9Y228 551 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 USP3Q9Y6I4 520 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 MUC22E2RYF6 1773 aaPredicted RBP9.44□□□□□ -0.9
TPM3-201ENST00000271850 MYH10P35580 1976 aa9.44□□□□□ -0.9
TPM3-201ENST00000271850 ITPR1Q14643 2758 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 CACNA1GO43497 2377 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 ATP8B3O60423 1300 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 FAM237AA0A1B0GTK4 181 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 SPAARA0A1B0GVQ0 90 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 TULP2O00295 520 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 HYAL3O43820 417 aaPredicted RBP9.43□□□□□ -0.9
TPM3-201ENST00000271850 STC2O76061 302 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 PENKP01210 267 aaPredicted RBP9.43□□□□□ -0.9
TPM3-201ENST00000271850 FAM200BP0CF97 657 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 RARGP13631 454 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 CD59P13987 128 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 ACO1P21399 889 aaKnown RBP9.43□□□□□ -0.9
TPM3-201ENST00000271850 NTSR1P30989 418 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 GCLMP48507 274 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 RPL6Q02878 288 aaKnown RBP9.43□□□□□ -0.9
TPM3-201ENST00000271850 ZNF33AQ06730 810 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 SGSM1Q2NKQ1 1148 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 SPDYCQ5MJ68 293 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 PPP1R26Q5T8A7 1209 aaPredicted RBP9.43□□□□□ -0.9
TPM3-201ENST00000271850 FYB2Q5VWT5 728 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 CEP135Q66GS9 1140 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 GRAMD4Q6IC98 578 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 KLHDC10Q6PID8 442 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 SCUBE3Q8IX30 993 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 GOLGA5Q8TBA6 731 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 KCNV2Q8TDN2 545 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 BHMTQ93088 406 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 CYFIP2Q96F07 1278 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 SPACA7Q96KW9 195 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms