RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 RTP4Q96DX8 246 aa24.03■■□□□ 1.44
RAB40B-201ENST00000269347 PRMT1Q99873 361 aaKnown RBP24.03■■□□□ 1.44
RAB40B-201ENST00000269347 TET1Q8NFU7 2136 aa24.03■■□□□ 1.44
RAB40B-201ENST00000269347 POC1B-GALNT4F8VUJ3 575 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 DDHD2O94830 711 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 METTL18O95568 372 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 VAV1P15498 845 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 RPL9P32969 192 aaKnown RBP24.02■■□□□ 1.44
RAB40B-201ENST00000269347 SF3A3Q12874 501 aaKnown RBP eCLIP24.02■■□□□ 1.44
RAB40B-201ENST00000269347 BBS9Q3SYG4 887 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 SIX6OS1Q8N1H7 587 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 FBXO36Q8NEA4 188 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 MGARPQ8TDB4 240 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 WDR6Q9NNW5 1121 aaKnown RBP24.02■■□□□ 1.44
RAB40B-201ENST00000269347 TMEM120BA0PK00 339 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 FAM107AO95990 144 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 FAM163BP0C2L3 166 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 BDNFP23560 247 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 STIP1P31948 543 aaKnown RBP24.02■■□□□ 1.44
RAB40B-201ENST00000269347 NOS2P35228 1153 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 PGFP49763 221 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 STAT4Q14765 748 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 TMED2Q15363 201 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 ZNF317Q96PQ6 595 aaPredicted RBP24.02■■□□□ 1.44
RAB40B-201ENST00000269347 CNOT10Q9H9A5 744 aaKnown RBP24.02■■□□□ 1.44
RAB40B-201ENST00000269347 RAB6BQ9NRW1 208 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 RABGEF1Q9UJ41 708 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 CDH9Q9ULB4 789 aa24.02■■□□□ 1.44
RAB40B-201ENST00000269347 LAMA2P24043 3122 aaKnown RBP24.01■■□□□ 1.43
RAB40B-201ENST00000269347 A0A087WUV0 522 aaPredicted RBP24.01■■□□□ 1.43
RAB40B-201ENST00000269347 EXOC1LA0A1B0GW35 172 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 BCLAF3A2AJT9 711 aaKnown RBP24.01■■□□□ 1.43
RAB40B-201ENST00000269347 IFNAR2P48551 515 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 DEFB115Q30KQ5 88 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 CLLU1OSQ5K130 101 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 KCNT2Q6UVM3 1135 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 SRRM1Q8IYB3 904 aaKnown RBP24.01■■□□□ 1.43
RAB40B-201ENST00000269347 EDEM1Q92611 657 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 TRIM56Q9BRZ2 755 aaKnown RBP24.01■■□□□ 1.43
RAB40B-201ENST00000269347 PLAC1Q9HBJ0 212 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 ARHGEF4Q9NR80 690 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 CHMP2BQ9UQN3 213 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 SNX10Q9Y5X0 201 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 NUP205Q92621 2012 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 F5H423 210 aaPredicted RBP24.01■■□□□ 1.43
RAB40B-201ENST00000269347 MFSD11O43934 449 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 PKN2Q16513 984 aaKnown RBP24.01■■□□□ 1.43
RAB40B-201ENST00000269347 FAM171BQ6P995 826 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 PCGF5Q86SE9 256 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 RNF180Q86T96 592 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 VSIG1Q86XK7 387 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 STKLD1Q8NE28 680 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 LGMNQ99538 433 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 POPDC2Q9HBU9 364 aa24.01■■□□□ 1.43
RAB40B-201ENST00000269347 ZBED1O96006 694 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 OR4Q2P0C623 313 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 DRD4P21917 467 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 RAB27AP51159 221 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 TUSC3Q13454 348 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 SLC7A14Q8TBB6 771 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 RSPH1Q8WYR4 309 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 ETNK1Q9HBU6 452 aa24■■□□□ 1.43
RAB40B-201ENST00000269347 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.99■■□□□ 1.43
RAB40B-201ENST00000269347 M0QZQ0 153 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 CDH16O75309 829 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 ARL4CP56559 192 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 GRIK3Q13003 919 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 CROCCP2Q86T23 111 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 CENPTQ96BT3 561 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 INTS9Q9NV88 658 aaKnown RBP23.99■■□□□ 1.43
RAB40B-201ENST00000269347 COL4A4P53420 1690 aaPredicted RBP23.99■■□□□ 1.43
RAB40B-201ENST00000269347 A0A1W2PQ45 241 aaPredicted RBP23.99■■□□□ 1.43
RAB40B-201ENST00000269347 A0A1W2PQY0 241 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 ZNF487B1APH4 448 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 C9IYK1 514 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 EBAG9O00559 213 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 ELK3P41970 407 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 GRIA1P42261 906 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 SLC8A3P57103 927 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 INTS6LQ5JSJ4 861 aaKnown RBP23.99■■□□□ 1.43
RAB40B-201ENST00000269347 CAND1Q86VP6 1230 aaKnown RBP23.99■■□□□ 1.43
RAB40B-201ENST00000269347 ANKRD42Q8N9B4 389 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 SCAMP5Q8TAC9 235 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 PYROXD1Q8WU10 500 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 OLFM3Q96PB7 478 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 CSNK1G1Q9HCP0 422 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 VWA8A3KMH1 1905 aa23.99■■□□□ 1.43
RAB40B-201ENST00000269347 A0A1W2PPM1 405 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 CREB3O43889 395 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 CYP11A1P05108 521 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 INHAP05111 366 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 GPNMBQ14956 572 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 ZNF534Q76KX8 674 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 FBF1Q8TES7 1133 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 CEP41Q9BYV8 373 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 DGKIO75912 1065 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 ODC1P11926 461 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 BRAFP15056 766 aa23.98■■□□□ 1.43
RAB40B-201ENST00000269347 RDXP35241 583 aaKnown RBP23.98■■□□□ 1.43
RAB40B-201ENST00000269347 DEUP1Q05D60 604 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms