RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 VPS33BQ9H267 617 aa22.94■■□□□ 1.26
CDR2-201ENST00000268383 KCNK4Q9NYG8 393 aa22.94■■□□□ 1.26
CDR2-201ENST00000268383 POLR2AP24928 1970 aaKnown RBP22.94■■□□□ 1.26
CDR2-201ENST00000268383 GABBR2O75899 941 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 RPL10AP62906 217 aaKnown RBP22.93■■□□□ 1.26
CDR2-201ENST00000268383 BSPRYQ5W0U4 402 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 RIPOR1Q6ZS17 1223 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 ACOT1Q86TX2 421 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 IFT122Q9HBG6 1241 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 PDGFCQ9NRA1 345 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 GGA3Q9NZ52 723 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 SIRPGQ9P1W8 387 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 STX18Q9P2W9 335 aaKnown RBP22.93■■□□□ 1.26
CDR2-201ENST00000268383 SPAG6O75602 509 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 SORBS2O94875 1100 aaKnown RBP22.93■■□□□ 1.26
CDR2-201ENST00000268383 VTNP04004 478 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 KCNA4P22459 653 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 ATG14Q6ZNE5 492 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 KHSRPQ92945 711 aaKnown RBP eCLIP22.93■■□□□ 1.26
CDR2-201ENST00000268383 FAM167AQ96KS9 214 aa22.93■■□□□ 1.26
CDR2-201ENST00000268383 PPEF2O14830 753 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 KLF11O14901 512 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 AMHR2Q16671 573 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 TTC30AQ86WT1 665 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 CFAP61Q8NHU2 1237 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 DEPDC1BQ8WUY9 529 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 C7orf26Q96N11 449 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 TNFSF13BQ9Y275 285 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 HBS1LQ9Y450 684 aaKnown RBP22.92■■□□□ 1.26
CDR2-201ENST00000268383 SOCS7O14512 581 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 BAG2O95816 211 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 UBTFL6P0CB48 400 aaPredicted RBP22.92■■□□□ 1.26
CDR2-201ENST00000268383 CYP2F1P24903 491 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 ACAP1Q15027 740 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 WDR78Q5VTH9 848 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 CASC4Q6P4E1 433 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 MAP7D3Q8IWC1 876 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 SCUBE1Q8IWY4 988 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 STKLD1Q8NE28 680 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 ZNF778Q96MU6 729 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 SPATC1LQ9H0A9 340 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 DHX35Q9H5Z1 703 aaKnown RBP22.92■■□□□ 1.26
CDR2-201ENST00000268383 GBA2Q9HCG7 927 aaPredicted RBP22.92■■□□□ 1.26
CDR2-201ENST00000268383 SLC7A8Q9UHI5 535 aa22.92■■□□□ 1.26
CDR2-201ENST00000268383 BARX2Q9UMQ3 279 aaPredicted RBP22.92■■□□□ 1.26
CDR2-201ENST00000268383 HDAC4P56524 1084 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 ATG16L1Q676U5 607 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 DENND5BQ6ZUT9 1274 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 CRLF3Q8IUI8 442 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 ULK2Q8IYT8 1036 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 NME7Q9Y5B8 376 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 WDR27A2RRH5 827 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 IL18RAPO95256 599 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 BPGMP07738 259 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 C6orf222P0C671 652 aaPredicted RBP22.91■■□□□ 1.26
CDR2-201ENST00000268383 SLC25A3Q00325 362 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 DALRD3Q5D0E6 543 aaKnown RBP22.91■■□□□ 1.26
CDR2-201ENST00000268383 CELF3Q5SZQ8 465 aaKnown RBP22.91■■□□□ 1.26
CDR2-201ENST00000268383 GADL1Q6ZQY3 521 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 TMPRSS6Q8IU80 811 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 USP6NLQ92738 828 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 MRPL45Q9BRJ2 306 aaKnown RBP22.91■■□□□ 1.26
CDR2-201ENST00000268383 PLA2G4CQ9UP65 541 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 LRCH1Q9Y2L9 728 aa22.91■■□□□ 1.26
CDR2-201ENST00000268383 SMIM24O75264 130 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 KRT38O76015 456 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 SDC4P31431 198 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 OLFML1Q6UWY5 402 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 PYROXD2Q8N2H3 581 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 EFCAB3Q8N7B9 438 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 CCDC106Q9BWC9 280 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 PDZD7Q9H5P4 517 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 NRDE2Q9H7Z3 1164 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 ZNF180Q9UJW8 692 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 PPM1HQ9ULR3 514 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 PPME1Q9Y570 386 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 CCNFP41002 786 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 AP1B1Q10567 949 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 STX3Q13277 289 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 PEX6Q13608 980 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 SLC9A4Q6AI14 798 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 KCNT2Q6UVM3 1135 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 CES3Q6UWW8 571 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 RSPH3Q86UC2 560 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 PPP1R14CQ8TAE6 165 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 GSDMBQ8TAX9 411 aa22.9■■□□□ 1.26
CDR2-201ENST00000268383 EBNA1BP2Q99848 306 aaKnown RBP22.9■■□□□ 1.26
CDR2-201ENST00000268383 PAPSS1O43252 624 aaPredicted RBP22.89■■□□□ 1.26
CDR2-201ENST00000268383 RPS12P25398 132 aaKnown RBP22.89■■□□□ 1.26
CDR2-201ENST00000268383 VGLL4Q14135 290 aa22.89■■□□□ 1.26
CDR2-201ENST00000268383 TMEM132DQ14C87 1099 aa22.89■■□□□ 1.26
CDR2-201ENST00000268383 FASTKD1Q53R41 847 aaKnown RBP22.89■■□□□ 1.26
CDR2-201ENST00000268383 LGSNQ5TDP6 509 aa22.89■■□□□ 1.26
CDR2-201ENST00000268383 RTP4Q96DX8 246 aa22.89■■□□□ 1.26
CDR2-201ENST00000268383 WWP1Q9H0M0 922 aa22.89■■□□□ 1.26
CDR2-201ENST00000268383 TAGLN3Q9UI15 199 aa22.89■■□□□ 1.26
CDR2-201ENST00000268383 PSAT1Q9Y617 370 aa22.89■■□□□ 1.26
CDR2-201ENST00000268383 BCLAF3A2AJT9 711 aaKnown RBP22.89■■□□□ 1.25
CDR2-201ENST00000268383 SPECC1L-ADORA2AF8WAN1 911 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms