RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 RTP2Q5QGT7 225 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 CCDC25Q86WR0 208 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 BCL7CQ8WUZ0 217 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 PGAP3Q96FM1 320 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 WDR6Q9NNW5 1121 aaKnown RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 CWC15Q9P013 229 aaKnown RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 PCDHB5Q9Y5E4 795 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 COL4A6Q14031 1691 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 DNALI1O14645 258 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 DGKIO75912 1065 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 CPB1P15086 417 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 GOT1P17174 413 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 CHKAP35790 457 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 ARL4AP40617 200 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 ARPP19P56211 112 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 EFHC2Q5JST6 749 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 HIBCHQ6NVY1 386 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 DARS2Q6PI48 645 aaKnown RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 VSTM1Q6UX27 236 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 LRIG3Q6UXM1 1119 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 B4GALNT4Q76KP1 1039 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 UNC45BQ8IWX7 931 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 DNAJC5GQ8N7S2 189 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 OR2W6PQ8NHA6 318 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 SLC9A7Q96T83 725 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 TRIM62Q9BVG3 475 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 PRDM5Q9NQX1 630 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 VPS18Q9P253 973 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 RCOR3Q9P2K3 495 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-201ENST00000266589 H0YGN5 161 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 H7C0C1 242 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 TRIM66O15016 1216 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 MAP3K6O95382 1288 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 F9P00740 461 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 ZFXP17010 805 aaPredicted RBP12□□□□□ -0.49
SCAF11-201ENST00000266589 ATP5OP48047 213 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 ALDH7A1P49419 539 aaKnown RBP12□□□□□ -0.49
SCAF11-201ENST00000266589 GPR15P49685 360 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 AIF1P55008 147 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 YWHAGP61981 247 aaKnown RBP eCLIP12□□□□□ -0.49
SCAF11-201ENST00000266589 PKN2Q16513 984 aaKnown RBP12□□□□□ -0.49
SCAF11-201ENST00000266589 DDR2Q16832 855 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 SDHAF4Q5VUM1 108 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 TAS1R1Q7RTX1 841 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 TAC4Q86UU9 113 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 FAM71DQ8N9W8 422 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 ATAD1Q8NBU5 361 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 STKLD1Q8NE28 680 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 NTAN1Q96AB6 310 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 C8orf48Q96LL4 319 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 TTPALQ9BTX7 342 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 ADAM7Q9H2U9 754 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 PABPC3Q9H361 631 aaKnown RBP12□□□□□ -0.49
SCAF11-201ENST00000266589 AAASQ9NRG9 546 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 NFS1Q9Y697 457 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 PLXNA3P51805 1871 aa12□□□□□ -0.49
SCAF11-201ENST00000266589 H3BRJ5 948 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 H7C4K7 107 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 RARGP13631 454 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 AMPD1P23109 780 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ITGB8P26012 769 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ADRA1BP35368 520 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 MAGEA11P43364 429 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 LBX1P52954 281 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 GBE1Q04446 702 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 CEP85LQ5SZL2 805 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 NCBP2-AS2Q69YL0 99 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ANKS3Q6ZW76 656 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 TTC9BQ8N6N2 239 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 DQX1Q8TE96 717 aaKnown RBP11.99□□□□□ -0.49
SCAF11-201ENST00000266589 RNF139Q8WU17 664 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 TSPYL1Q9H0U9 437 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 EPB41L4BQ9H329 900 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 SEMA4AQ9H3S1 761 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 CWH43Q9H720 699 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ANLNQ9NQW6 1124 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 FBXW11Q9UKB1 542 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 TPX2Q9ULW0 747 aaKnown RBP11.99□□□□□ -0.49
SCAF11-201ENST00000266589 GOLGA8KD6RF30 607 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 I6L893 689 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-201ENST00000266589 CREB3O43889 395 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 TBC1D4O60343 1298 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 TIMP1P01033 207 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 CSF2RAP15509 400 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 SCAPQ12770 1279 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ARL13BQ3SXY8 428 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 BTBD8Q5XKL5 378 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 DENND2CQ68D51 928 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 PRSS55Q6UWB4 352 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-201ENST00000266589 RSPO2Q6UXX9 243 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-201ENST00000266589 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 NUP93Q8N1F7 819 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 TOP1MTQ969P6 601 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 PWWP2AQ96N64 755 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ARHGEF4Q9NR80 690 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ABCC13Q9NSE7 274 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 ETNK2Q9NVF9 386 aa11.99□□□□□ -0.49
SCAF11-201ENST00000266589 DNAJC17Q9NVM6 304 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms