RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GSSP48637 474 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 CYP2J2P51589 502 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 NRLP54845 237 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 PSMC1P62191 440 aaKnown RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 CAV1Q03135 178 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 FAAP100Q0VG06 881 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 GPS1Q13098 491 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 NBPF12Q5TAG4 269 aaPredicted RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 NIPAL1Q6NVV3 410 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 PTAR1Q7Z6K3 402 aaPredicted RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 ALLCQ8N6M5 410 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 DDHD1Q8NEL9 900 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 SREK1Q8WXA9 508 aaKnown RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 SENP1Q9P0U3 644 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 HACL1Q9UJ83 578 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 ITGB1BP2Q9UKP3 347 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 PCDHGA8Q9Y5G5 932 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 ZNF541Q9H0D2 1346 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 CENPFP49454 3210 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 TISP43B9A030 160 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 GCNT3O95395 438 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 FGFR3P22607 806 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 S100A1P23297 94 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 PPARGP37231 505 aaPredicted RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 GRIA3P42263 894 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 TAS2R40P59535 323 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 SP4Q02446 784 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 CREB5Q02930 508 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 E2F2Q14209 437 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 CARTPTQ16568 116 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 TIGD2Q4W5G0 525 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 ADGRD1Q6QNK2 874 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 PHTF2Q8N3S3 785 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 APOL6Q9BWW8 343 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 C1orf21Q9H246 121 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 BMP2KQ9NSY1 1161 aaPredicted RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 KCNK4Q9NYG8 393 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 RAB26Q9ULW5 256 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 NR2E3Q9Y5X4 410 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 DNALI1O14645 258 aaPredicted RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 PPP1R11O60927 126 aaPredicted RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 SLITRK3O94933 977 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 HSD17B4P51659 736 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ARSEP51690 589 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 IRX4P78413 519 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ITGADQ13349 1161 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 CHI3L2Q15782 390 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 INAQ16352 499 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 TEX44Q53QW1 395 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ASPRV1Q53RT3 343 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 TMEM179Q6ZVK1 233 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 MAVSQ7Z434 540 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 POLNQ7Z5Q5 900 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 UPF1Q92900 1129 aaKnown RBP eCLIP9.06□□□□□ -0.962e-7■■■■■ 34
VAPB-201ENST00000265619 TAMM41Q96BW9 452 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ZMAT2Q96NC0 199 aaKnown RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 SENP7Q9BQF6 1050 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 OLAHQ9NV23 265 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ALOX15BO15296 676 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 TM9SF1O15321 606 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 PEX10O60683 326 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 RPA1P27694 616 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 TMPRSS15P98073 1019 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 FMO1Q01740 532 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 AARS2Q5JTZ9 985 aaKnown RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 LDLRAP1Q5SW96 308 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 LYSMD3Q7Z3D4 306 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 CHERPQ8IWX8 916 aaKnown RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 DDI1Q8WTU0 396 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ACSF2Q96CM8 615 aaPredicted RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 FEM1CQ96JP0 617 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 FAM84AQ96KN4 292 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 CCDC17Q96LX7 622 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 SEMA6AQ9H2E6 1030 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 IGSF9Q9P2J2 1179 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ANAPC7Q9UJX3 599 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 NOCTQ9UK39 431 aaKnown RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 ST14Q9Y5Y6 855 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ZBTB39O15060 712 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 HSPA8P11142 646 aaKnown RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 PHBP35232 272 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 MRPS5P82675 430 aaKnown RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 NR1D2Q14995 579 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 ZNF829Q3KNS6 432 aaPredicted RBP9.06□□□□□ -0.96
VAPB-201ENST00000265619 PRR16Q569H4 304 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 DSG4Q86SJ6 1040 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 CHSY1Q86X52 802 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 EPS8L1Q8TE68 723 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 EGLN2Q96KS0 407 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 DHRS4Q9BTZ2 278 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 DEFB129Q9H1M3 183 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 EPS15L1Q9UBC2 864 aa9.06□□□□□ -0.96
VAPB-201ENST00000265619 TRIM64CA6NLI5 447 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 PDXKO00764 312 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 KLHL41O60662 606 aa9.05□□□□□ -0.96
VAPB-201ENST00000265619 SIN3BO75182 1162 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1148.2 ms