RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 ALDH3A2P51648 485 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 LONRF1Q17RB8 773 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 BMT2Q1RMZ1 405 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TKFCQ3LXA3 575 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 KCTD21Q4G0X4 260 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 PEX5LQ8IYB4 626 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 AKAP1Q92667 903 aaKnown RBP eCLIP5.6□□□□□ -1.51
XRN1-201ENST00000264951 PIGSQ96S52 555 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MAP3K14Q99558 947 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TMEM8AQ9HCN3 771 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SEC31BQ9NQW1 1179 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 CLN6Q9NWW5 311 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 CRLS1Q9UJA2 301 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 NDUFAF1Q9Y375 327 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 DYRK1BQ9Y463 629 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 AFF2P51816 1311 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 DNAJA2O60884 412 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 H2AFXP16104 143 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 COILP38432 576 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 ALDH6A1Q02252 535 aaKnown RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 CHRNDQ07001 517 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TNK2Q07912 1038 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 HKDC1Q2TB90 917 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SYCE2Q6PIF2 218 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SCARA5Q6ZMJ2 495 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SLC13A5Q86YT5 568 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 CHPFQ8IZ52 775 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TTC29Q8NA56 475 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 NEDD1Q8NHV4 660 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ZC3H10Q96K80 434 aaKnown RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 MARCOQ9UEW3 520 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 PCSK1NQ9UHG2 260 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 GPC6Q9Y625 555 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 GCC2Q8IWJ2 1684 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 CFAP43Q8NDM7 1665 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 DFFAO00273 331 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 CHST10O43529 356 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 NR2F6P10588 404 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 UCHL3P15374 230 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MYL9P24844 172 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ITGA8P53708 1063 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 GALCP54803 685 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ANO7Q6IWH7 933 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 NYAP1Q6ZVC0 841 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SLC44A2Q8IWA5 706 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 DHX40Q8IX18 779 aaKnown RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 C10orf53Q8N6V4 93 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 AFG1LQ8WV93 481 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 C18orf25Q96B23 403 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 ZHX1-C8orf76Q96EF9 292 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SGF29Q96ES7 293 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 VAT1Q99536 393 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MIEF1Q9NQG6 463 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 EMSYQ7Z589 1322 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 A0A1W2PQ72 361 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 CYP2E1P05181 493 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 S100A12P80511 92 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SCN1BQ07699 218 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MGAT5Q09328 741 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 DPYSQ14117 519 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 NR1D2Q14995 579 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ZSWIM7Q19AV6 140 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ZFP69Q49AA0 526 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 COBLL1Q53SF7 1204 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TXNDC11Q6PKC3 985 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SCN4BQ8IWT1 228 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ANKRD13AQ8IZ07 590 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 STK40Q8N2I9 435 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 KIF2BQ8N4N8 673 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SRFBP1Q8NEF9 429 aaKnown RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 ZSWIM1Q9BR11 485 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 NT5C1AQ9BXI3 368 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TRIM9Q9C026 710 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 CLPBQ9H078 707 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 NMRAL1Q9HBL8 299 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TMBIM4Q9HC24 238 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 BARHL2Q9NY43 387 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 GGA3Q9NZ52 723 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 SLC39A10Q9ULF5 831 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 RNF112Q9ULX5 631 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 COQ6Q9Y2Z9 468 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 PCDHA10Q9Y5I2 948 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 LOC100653049A0A140TA62 436 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MPZL2O60487 215 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 PGK1P00558 417 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 PTPN7P35236 360 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MAPK9P45984 424 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 TCEA2Q15560 299 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 CHRNA2Q15822 529 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 GADL1Q6ZQY3 521 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ARCQ7LC44 396 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ZNF669Q96BR6 464 aaPredicted RBP5.6□□□□□ -1.51
XRN1-201ENST00000264951 HINFPQ9BQA5 517 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 ZNF302Q9NR11 478 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MOSPD1Q9UJG1 213 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 GDAQ9Y2T3 454 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 MEMO1Q9Y316 297 aa5.6□□□□□ -1.51
XRN1-201ENST00000264951 GRIN2AQ12879 1464 aa5.59□□□□□ -1.51
XRN1-201ENST00000264951 TRDMT1O14717 391 aaKnown RBP5.59□□□□□ -1.51
XRN1-201ENST00000264951 ATP9BO43861 1147 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms