RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 SNX31Q8N9S9 440 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 PTCD3Q96EY7 689 aaKnown RBP12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 MEGF6O75095 1541 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 DDHD2O94830 711 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 GLRA2P23416 452 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 IL12AP29459 219 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 JAM2P57087 298 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 MDH1BQ5I0G3 518 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 RASSF5Q8WWW0 418 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 KLF6Q99612 283 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 CCNB1IP1Q9NPC3 277 aa12.02□□□□□ -0.49
DNMT3A-201ENST00000264709 CYP3A7-CYP3A51PA0A087WV96 503 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ASMTLO95671 621 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 GPD1P21695 349 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 CYP3A7P24462 503 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 TOP3AQ13472 1001 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 SPOUT1Q5T280 376 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 DDIASQ8IXT1 998 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ZNF560Q96MR9 790 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ZNF180Q9UJW8 692 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 RPTORQ8N122 1335 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ANGEL2Q5VTE6 544 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 SLC47A2Q86VL8 602 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 AMER2Q8N7J2 671 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 TNIP3Q96KP6 325 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 GCNAQ96QF7 691 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 WDR41Q9HAD4 459 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 CHKBQ9Y259 395 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 SNTNA6NMZ2 147 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 LDLRP01130 860 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 EIF4BP23588 611 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 GMCL1P1Q8NEA9 526 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 OTUB1Q96FW1 271 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 TMEM121Q9BTD3 319 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 CYP24A1Q07973 514 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 PIWIL4Q7Z3Z4 852 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 OR7A2PQ8NGA2 310 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 RAB2BQ8WUD1 216 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 GMCL1Q96IK5 515 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 FAXDC2Q96IV6 333 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ARMCX1Q9P291 453 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 RPL14P50914 215 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 WDR72Q3MJ13 1102 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 BBS12Q6ZW61 710 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 SKA1Q96BD8 255 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 RPL22P35268 128 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 CAPRIN1Q14444 709 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ANO4Q32M45 955 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 C11orf91Q3C1V1 193 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ZNF568Q3ZCX4 644 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ZC2HC1CQ53FD0 456 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 N4BP2L1Q5TBK1 243 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 SCARA3Q6AZY7 606 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 HM13Q8TCT9 377 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 C1orf167Q5SNV9 1468 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 AKR1B1P15121 316 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 PTGER2P43116 358 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ATP1A4Q13733 1029 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 NR1D2Q14995 579 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 GRTP1Q5TC63 336 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ZDHHC17Q8IUH5 632 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 DHRSXQ8N5I4 330 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 ACOT9Q9Y305 439 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 FIS1Q9Y3D6 152 aa12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-201ENST00000264709 RGSL1A5PLK6 1076 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 HACD1B0YJ81 288 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 UBE2Q2LH0YL09 131 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 POU5F1BQ06416 359 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 FKBP9P1Q75LS8 142 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 SLC5A5Q92911 643 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 FBXO28Q9NVF7 368 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 ARHGEF38Q9NXL2 777 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
DNMT3A-201ENST00000264709 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 GPAT2Q6NUI2 795 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 SCARA5Q6ZMJ2 495 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 NANOGNBQ7Z5D8 188 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 NKD2Q969F2 451 aaPredicted RBP12□□□□□ -0.49
DNMT3A-201ENST00000264709 CPSF3Q9UKF6 684 aaKnown RBP12□□□□□ -0.49
DNMT3A-201ENST00000264709 RNF225M0QZC1 329 aaPredicted RBP12□□□□□ -0.49
DNMT3A-201ENST00000264709 ANXA9O76027 345 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 SESN2P58004 480 aaPredicted RBP12□□□□□ -0.49
DNMT3A-201ENST00000264709 ARPC4P59998 168 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 C8orf37Q96NL8 207 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 OSBPL6Q9BZF3 934 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 RAD54BQ9Y620 910 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 E9PBE3 544 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 EPHB6O15197 1021 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 PMM2O15305 246 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 CNOT3O75175 753 aaKnown RBP12□□□□□ -0.49
DNMT3A-201ENST00000264709 SLC12A3P55017 1021 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 IL1RL1Q01638 556 aa12□□□□□ -0.49
DNMT3A-201ENST00000264709 BST1Q10588 318 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms