RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 NDST1P52848 882 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 CDC16Q13042 620 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 TRIP10Q15642 601 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 EML3Q32P44 896 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 PPM1JQ5JR12 505 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 FAM160B1Q5W0V3 765 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 MOCOSQ96EN8 888 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 SNRNP25Q9BV90 132 aaKnown RBP12.82□□□□□ -0.36
CHMP3-201ENST00000263856 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 ZNF358Q9NW07 568 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 RPL26L1Q9UNX3 145 aaKnown RBP12.82□□□□□ -0.36
CHMP3-201ENST00000263856 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 LACTBL1A8MY62 500 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 NEMP1O14524 444 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 CHADO15335 359 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 DPEP1P16444 411 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 SDC4P31431 198 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 PHKA2P46019 1235 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 AP3M2P53677 418 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 TRMT5Q32P41 509 aaKnown RBP12.81□□□□□ -0.36
CHMP3-201ENST00000263856 DNAL1Q4LDG9 190 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 RABGAP1LQ5R372 815 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 ANGEL2Q5VTE6 544 aaKnown RBP12.81□□□□□ -0.36
CHMP3-201ENST00000263856 ZPBP2Q6X784 338 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 RTKN2Q8IZC4 609 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 TEPSINQ96N21 525 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 WDR35Q9P2L0 1181 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 MFHAS1Q9Y4C4 1052 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 E9PBE3 544 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 TPP1O14773 563 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-201ENST00000263856 KLHL41O60662 606 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 BPGMP07738 259 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 GOLGA7BQ2TAP0 167 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 HSDL1Q3SXM5 330 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 MPZL3Q6UWV2 235 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 PCDH19Q8TAB3 1148 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 PPP4R1Q8TF05 950 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 AGAP3Q96P47 875 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 CNPY3Q9BT09 278 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 TMEM134Q9H6X4 195 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 MINDY3Q9H8M7 445 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 SIX4Q9UIU6 781 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 SOX13Q9UN79 622 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 LTBP4Q8N2S1 1624 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 GOLGA8QA0A0J9YX86 632 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 GOLGA8OA6NCC3 632 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 GOLGA8NF8WBI6 632 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 SPAG6O75602 509 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 PGK2P07205 417 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 SLC1A6P48664 564 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 ZNF143P52747 638 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-201ENST00000263856 EFNA5P52803 228 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 ROR2Q01974 943 aaKnown RBP12.81□□□□□ -0.36
CHMP3-201ENST00000263856 GHRHRQ02643 423 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 OLIG2Q13516 323 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 FAM47CQ5HY64 1035 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 FKBP1CQ5VVH2 108 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 MAP1SQ66K74 1059 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-201ENST00000263856 DPY19L2Q6NUT2 758 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 NET1Q7Z628 596 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-201ENST00000263856 ACOT1Q86TX2 421 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 DEFB107AQ8IZN7 70 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 CCNYQ8ND76 341 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 GSDMBQ8TAX9 411 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 EFR3BQ9Y2G0 817 aa12.81□□□□□ -0.36
CHMP3-201ENST00000263856 A6NJR5 290 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 RNASEH1O60930 286 aaKnown RBP12.8□□□□□ -0.36
CHMP3-201ENST00000263856 DGKIO75912 1065 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 FARP2O94887 1054 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-201ENST00000263856 PEX2P28328 305 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 GSTT1P30711 240 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 RAB27AP51159 221 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 USP4Q13107 963 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 EFHC1Q5JVL4 640 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 SPDYAQ5MJ70 313 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
CHMP3-201ENST00000263856 SH2D5Q6ZV89 423 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 HPS6Q86YV9 775 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 RNF148Q8N7C7 305 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHMP3-201ENST00000263856 COPS5Q92905 334 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 HPDLQ96IR7 371 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 CDT1Q9H211 546 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 MMADHCQ9H3L0 296 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-201ENST00000263856 AS3MTQ9HBK9 375 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 CAPN14A8MX76 684 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 CFLARO15519 480 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 DCXO43602 365 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 ATG7O95352 703 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 PGM3O95394 542 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 PTPRAP18433 802 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 CYP2F1P24903 491 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 CDH5P33151 784 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-201ENST00000263856 ACTR3P61158 418 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 ITGA9Q13797 1035 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms