RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 PCYOX1Q9UHG3 505 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 PAIP2BQ9ULR5 123 aaKnown RBP11.06□□□□□ -0.64
CD44-201ENST00000263398 ATP11BQ9Y2G3 1177 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 RCCD1A6NED2 376 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 MPOP05164 745 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 KRT8P05787 483 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 MIPP30301 263 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 PPP3CCP48454 512 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 ZNF157P51786 506 aaPredicted RBP11.06□□□□□ -0.64
CD44-201ENST00000263398 CSHL1Q14406 222 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 CCDC60Q8IWA6 550 aaPredicted RBP11.06□□□□□ -0.64
CD44-201ENST00000263398 HS6ST3Q8IZP7 471 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 KAT5Q92993 513 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 OTULINQ96BN8 352 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 OXNAD1Q96HP4 312 aaPredicted RBP11.06□□□□□ -0.64
CD44-201ENST00000263398 FICDQ9BVA6 458 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 SPATC1LQ9H0A9 340 aa11.06□□□□□ -0.64
CD44-201ENST00000263398 FAM95CA0A1B0GW59 222 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 DDHD2O94830 711 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 SERPIND1P05546 499 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 ATP5BP06576 529 aaKnown RBP11.05□□□□□ -0.64
CD44-201ENST00000263398 YY1P25490 414 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 PRKAA2P54646 552 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 YWHAZP63104 245 aaKnown RBP11.05□□□□□ -0.64
CD44-201ENST00000263398 SLC34A1Q06495 639 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 GPR141Q7Z602 305 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 DDX53Q86TM3 631 aaKnown RBP11.05□□□□□ -0.64
CD44-201ENST00000263398 SLC22A9Q8IVM8 553 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 FBXO32Q969P5 355 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 SIKE1Q9BRV8 207 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.64
CD44-201ENST00000263398 TMEM150BA6NC51 233 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 UBDO15205 165 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 STRNO43815 780 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 HMGCRP04035 888 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 MAP3K7CLP57077 242 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 CSTF3Q12996 717 aaKnown RBP11.05□□□□□ -0.64
CD44-201ENST00000263398 CDH18Q13634 790 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 NFYCQ13952 458 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 NFE2Q16621 373 aaPredicted RBP11.05□□□□□ -0.64
CD44-201ENST00000263398 AGKQ53H12 422 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 ZBTB49Q6ZSB9 765 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 NT5DC4Q86YG4 428 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 SLC9A9Q8IVB4 645 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 COLEC11Q9BWP8 271 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 GGA2Q9UJY4 613 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 DSEQ9UL01 958 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 RAD54BQ9Y620 910 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 ADGRA3Q8IWK6 1321 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 TRDMT1O14717 391 aaKnown RBP11.05□□□□□ -0.64
CD44-201ENST00000263398 SNX3O60493 162 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 UPP2O95045 317 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 RPLP2P05387 115 aaKnown RBP11.05□□□□□ -0.64
CD44-201ENST00000263398 TPBGLP0DKB5 382 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 ALADP13716 330 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 ADRA1DP25100 572 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 CD151P48509 253 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 SLC1A6P48664 564 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 TRIM69Q86WT6 500 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 CKAP2Q8WWK9 683 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 ZC4H2Q9NQZ6 224 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 C15orf41Q9Y2V0 281 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 ACTL7BQ9Y614 415 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 GAKO14976 1311 aa11.05□□□□□ -0.64
CD44-201ENST00000263398 CYP3A7-CYP3A51PA0A087WV96 503 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 ANKRD63C9JTQ0 380 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 CSDE1O75534 798 aaKnown RBP11.04□□□□□ -0.64
CD44-201ENST00000263398 PSMD10O75832 226 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 CRTAMO95727 393 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 CYP3A7P24462 503 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 MMRN1Q13201 1228 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 FUT11Q495W5 492 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 GRTP1Q5TC63 336 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 LRRC38Q5VT99 294 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 HES6Q96HZ4 224 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 PRDM5Q9NQX1 630 aaPredicted RBP11.04□□□□□ -0.64
CD44-201ENST00000263398 TBC1D13Q9NVG8 400 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 SPASTQ9UBP0 616 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 F8VP50 259 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 SMIM22K7EJ46 135 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 ATP9AO75110 1047 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 THPOP40225 353 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 CDK7P50613 346 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 RHBDL3P58872 404 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 FAAP100Q0VG06 881 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 ITGB3BPQ13352 177 aaPredicted RBP11.04□□□□□ -0.64
CD44-201ENST00000263398 TRIM60Q495X7 471 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 DEPDC1Q5TB30 811 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 IYDQ6PHW0 289 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 ZSWIM2Q8NEG5 633 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 PPP2R3CQ969Q6 453 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 OSMRQ99650 979 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 MMADHCQ9H3L0 296 aaPredicted RBP11.04□□□□□ -0.64
CD44-201ENST00000263398 NRDE2Q9H7Z3 1164 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 IMPAD1Q9NX62 359 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 UBP1Q9NZI7 540 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 TUBGCP4Q9UGJ1 667 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 TRHDEQ9UKU6 1024 aa11.04□□□□□ -0.64
CD44-201ENST00000263398 A0A096LPK6 155 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms