RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PLLPQ9Y342 182 aa9.46□□□□□ -0.9
MSH4-201ENST00000263187 HMX2A2RU54 273 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 SLC15A5A6NIM6 579 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 C2CD4BA6NLJ0 364 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 ACKR2O00590 384 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 STK10O94804 968 aaKnown RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 CD1EP15812 388 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 CDH5P33151 784 aaPredicted RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 SLC18A1P54219 525 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 SLC34A1Q06495 639 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 DALRD3Q5D0E6 543 aaKnown RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 METTL7BQ6UX53 244 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 SH2D5Q6ZV89 423 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 AZIN2Q96A70 460 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 KLRG1Q96E93 195 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 GPR20Q99678 358 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 MRPL45Q9BRJ2 306 aaKnown RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 CNPY3Q9BT09 278 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 KLC2Q9H0B6 622 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 DPEP3Q9H4B8 488 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 PSAT1Q9Y617 370 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 EVPLQ92817 2033 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 GOLGA8TH3BQL2 631 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 NPTXRO95502 500 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 RARBP10826 455 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 NCF2P19878 526 aaPredicted RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 STIP1P31948 543 aaKnown RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 PTPN7P35236 360 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 MSX2P35548 267 aaPredicted RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 SLC10A6Q3KNW5 377 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 FAM131BQ86XD5 332 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 CRLF3Q8IUI8 442 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 ENDOVQ8N8Q3 282 aaKnown RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 CCNYQ8ND76 341 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 ALKBH8Q96BT7 664 aaKnown RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 KIF12Q96FN5 646 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 UNKQ9C0B0 810 aaKnown RBP9.45□□□□□ -0.9
MSH4-201ENST00000263187 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 PCDH18Q9HCL0 1135 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 PNPOQ9NVS9 261 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 KCNG1Q9UIX4 513 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 PPM1HQ9ULR3 514 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 DNAJC16Q9Y2G8 782 aa9.45□□□□□ -0.9
MSH4-201ENST00000263187 IGKV6D-21A0A0A0MT36 114 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 DHRS4L1P0CG22 281 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TXNP10599 105 aaKnown RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 GNAT1P11488 350 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 CYP2F1P24903 491 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 SDC4P31431 198 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 MBTD1Q05BQ5 628 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 VGLL4Q14135 290 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 MXD4Q14582 209 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 FASTKD1Q53R41 847 aaKnown RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 KCNT2Q6UVM3 1135 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 IZUMO2Q6UXV1 221 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 OR6B3Q8NGW1 331 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 SH3TC2Q8TF17 1288 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 MCRS1Q96EZ8 462 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 PANX3Q96QZ0 392 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 LHX5Q9H2C1 402 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 KRT82Q9NSB4 513 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ADAMTS5Q9UNA0 930 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 A6NHS1 94 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TRAFD1O14545 582 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 MAP3K7O43318 606 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 APOEP02649 317 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ERVK-10P10266 1014 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 CCDC130P13994 396 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 SP100P23497 879 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 MLH1P40692 756 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 AP3M2P53677 418 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 SLC18A2Q05940 514 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 STX3Q13277 289 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TFDP2Q14188 446 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TCHHL1Q5QJ38 904 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 CDCA2Q69YH5 1023 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 PPP1R2P3Q6NXS1 205 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ATG14Q6ZNE5 492 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TSHZ1Q6ZSZ6 1077 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 CMC1Q7Z7K0 106 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TTC30AQ86WT1 665 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 SCUBE1Q8IWY4 988 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ADGRF2Q8IZF7 708 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 PPFIBP2Q8ND30 876 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ZNF483Q8TF39 744 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 TEKT4Q8WW24 435 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TSC22D3Q99576 134 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 OXCT2Q9BYC2 517 aaPredicted RBP9.44□□□□□ -0.9
MSH4-201ENST00000263187 SPATC1LQ9H0A9 340 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 ELP3Q9H9T3 547 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 TXNRD2Q9NNW7 524 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 CNTN3Q9P232 1028 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 PAK5Q9P286 719 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 SLC7A8Q9UHI5 535 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 SPECC1L-ADORA2AF8WAN1 911 aa9.44□□□□□ -0.9
MSH4-201ENST00000263187 B4GALT4O60513 344 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms