RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 KCNJ1P48048 391 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 CXCR3P49682 368 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 SNX1Q13596 522 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 DRICH1Q6PGQ1 229 aaPredicted RBP23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 CCDC105Q8IYK2 499 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 HNRNPLLQ8WVV9 542 aaKnown RBP23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 AUTS2Q8WXX7 1259 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 SEC14L1Q92503 715 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 KCTD15Q96SI1 283 aaPredicted RBP23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 SMOC2Q9H3U7 446 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 OSER1Q9NX31 292 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 GMIPQ9P107 970 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 FNIP2Q9P278 1114 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 FBXW11Q9UKB1 542 aa23.8■■□□□ 1.4
SMARCB1-201ENST00000263121 SEC24AO95486 1093 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 CTSAP10619 480 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 SCAPQ12770 1279 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 MTMR3Q13615 1198 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 KLHL23Q8NBE8 558 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 CASKIN2Q8WXE0 1202 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 TRIM51Q9BSJ1 452 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 TTLL2Q9BWV7 592 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 MAGEB5Q9BZ81 275 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 RXFP1Q9HBX9 757 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 ZNF638Q14966 1978 aaKnown RBP23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 PLXNA4Q9HCM2 1894 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 SLC38A8A6NNN8 435 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 LIASO43766 372 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 MYBL2P10244 700 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 DNAJB2P25686 324 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 ADRA1BP35368 520 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 DYNLT1P63172 113 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 CREMQ03060 361 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 TFDP2Q14188 446 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 ANKRD20A8PQ5CZ79 823 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 TTC13Q8NBP0 860 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 FBXO32Q969P5 355 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 FAM118BQ9BPY3 351 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 FRMD8P1Q9BZ68 369 aaPredicted RBP23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 RASAL2Q9UJF2 1139 aa23.79■■□□□ 1.4
SMARCB1-201ENST00000263121 ESYT3A0FGR9 886 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 IRAK2O43187 625 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 ERLIN1O75477 346 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 PPP6R3Q5H9R7 873 aaPredicted RBP23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 MSANTD2Q6P1R3 559 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 PQLC3Q8N755 202 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 PCDH19Q8TAB3 1148 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 GIPC2Q8TF65 315 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 ERP44Q9BS26 406 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 MAK16Q9BXY0 300 aaKnown RBP23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 RAB17Q9H0T7 212 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 ANLNQ9NQW6 1124 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 TMPRSS4Q9NRS4 437 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 RCOR3Q9P2K3 495 aaPredicted RBP23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 SSX2IPQ9Y2D8 614 aa23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 UTP11Q9Y3A2 253 aaKnown RBP23.78■■□□□ 1.4
SMARCB1-201ENST00000263121 I6L893 689 aaPredicted RBP23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 APOC4-APOC2K7ER74 178 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 ECEL1O95672 775 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 APOC2P02655 101 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 GBP1P32455 592 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 PSEN1P49768 467 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 TAF10Q12962 218 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 SLC9A4Q6AI14 798 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 SND1Q7KZF4 910 aaKnown RBP eCLIP23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 PYROXD2Q8N2H3 581 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 ATL2Q8NHH9 583 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 SLC35B2Q8TB61 432 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 GRK7Q8WTQ7 553 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 CASP10Q92851 521 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 NKD2Q969F2 451 aaPredicted RBP23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 HAUS1Q96CS2 278 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 CLIC5Q9NZA1 410 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 FEZ2Q9UHY8 353 aaPredicted RBP23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 DNPEPQ9ULA0 475 aa23.77■■□□□ 1.4
SMARCB1-201ENST00000263121 TEX28O15482 410 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 BMPR1AP36894 532 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 CARSP49589 748 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 OTUD4Q01804 1114 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 TRADDQ15628 312 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 KCTD19Q17RG1 926 aaPredicted RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 EFHC2Q5JST6 749 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 DUPD1Q68J44 220 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 ACTL9Q8TC94 416 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 RNF139Q8WU17 664 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 DPF3Q92784 378 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 CSPG4P5Q96PW8 444 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 CYP4F11Q9HBI6 524 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 CWC15Q9P013 229 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 MAFFQ9ULX9 164 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 ZDHHC11BP0C7U3 371 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 VCPP55072 806 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 BYSLQ13895 437 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 OASLQ15646 514 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 ARL13BQ3SXY8 428 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 TMCO3Q6UWJ1 677 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 SYDE1Q6ZW31 735 aaPredicted RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 GSPT2Q8IYD1 628 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms