RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SYPP08247 313 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 CEACAM1P13688 526 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 GABRG2P18507 467 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 PMLP29590 882 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 HARS2P49590 506 aaKnown RBP12.85□□□□□ -0.35
TRAF4-202ENST00000262396 PGFP49763 221 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 YWHAGP61981 247 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAF4-202ENST00000262396 ZNF33AQ06730 810 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 CETN1Q12798 172 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 BECN1Q14457 450 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 GOLGA7BQ2TAP0 167 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 C1orf220Q5T0J3 134 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 SIX6OS1Q8N1H7 587 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 PHTF2Q8N3S3 785 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 DEFB124Q8NES8 71 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 GOLGA1Q92805 767 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-202ENST00000262396 STARD13Q9Y3M8 1113 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 RAD54BQ9Y620 910 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 PTPRDP23468 1912 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 HHLA1C9JL84 531 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 GFRA2O00451 464 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 GIPC1O14908 333 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 ZBED1O96006 694 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 NDUFV2P19404 249 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 CSRP1P21291 193 aaKnown RBP12.84□□□□□ -0.35
TRAF4-202ENST00000262396 HOXD12P35452 270 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 TKTL1P51854 596 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 FKBP3Q00688 224 aaKnown RBP12.84□□□□□ -0.35
TRAF4-202ENST00000262396 LRMPQ12912 555 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 PNOCQ13519 176 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 SGO2Q562F6 1265 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 WDR45BQ5MNZ6 344 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 PIGZQ86VD9 579 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 DENND1CQ8IV53 801 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 TRIML1Q8N9V2 468 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 FOXJ1Q92949 421 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 FAXDC2Q96IV6 333 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 HSPA12BQ96MM6 686 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 ACOX2Q99424 681 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
TRAF4-202ENST00000262396 MIR1-1HGQ9H1L0 117 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 GOLPH3LQ9H4A5 285 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 OLA1Q9NTK5 396 aaKnown RBP12.84□□□□□ -0.35
TRAF4-202ENST00000262396 SUSD2Q9UGT4 822 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 PCDHB9Q9Y5E1 797 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
TRAF4-202ENST00000262396 FAM237AA0A1B0GTK4 181 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 PRRT4C9JH25 899 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 NPC1O15118 1278 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
TRAF4-202ENST00000262396 SERPINF2P08697 491 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 BCAT1P54687 386 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 PLEKHG6Q3KR16 790 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 CCDC40Q4G0X9 1142 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 ANKS1BQ7Z6G8 1248 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 SCD5Q86SK9 330 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 CCDC117Q8IWD4 279 aaPredicted RBP12.83□□□□□ -0.36
TRAF4-202ENST00000262396 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 PRCCQ92733 491 aaPredicted RBP12.83□□□□□ -0.36
TRAF4-202ENST00000262396 SEMA4DQ92854 862 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 UBXN6Q9BZV1 441 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
TRAF4-202ENST00000262396 PRDM16Q9HAZ2 1276 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 TMEM74BQ9NUR3 256 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 ARMCX3Q9UH62 379 aaPredicted RBP12.83□□□□□ -0.36
TRAF4-202ENST00000262396 PILRBQ9UKJ0 227 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 MYH10P35580 1976 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 THADAQ6YHU6 1953 aa12.83□□□□□ -0.36
TRAF4-202ENST00000262396 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
TRAF4-202ENST00000262396 IGHV1OR15-9A0A0B4J2B8 117 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 A0A1W2PQF6 199 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 CDX4O14627 284 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-202ENST00000262396 PSMA7O14818 248 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 TSPAN3O60637 253 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 LCP1P13796 627 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-202ENST00000262396 CD6P30203 668 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 RAD23BP54727 409 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 SIM1P81133 766 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-202ENST00000262396 SHC2P98077 582 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 BST2Q10589 180 aaKnown RBP12.82□□□□□ -0.36
TRAF4-202ENST00000262396 CUL2Q13617 745 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 MPPE1Q53F39 396 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 ZNF658Q5TYW1 1059 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-202ENST00000262396 ARHGAP17Q68EM7 881 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 KIAA1211LQ6NV74 962 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 SERPINA13PQ6UXR4 307 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 Q6ZNB5 142 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 SLC4A11Q8NBS3 891 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 TATDN2Q93075 761 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 PLD4Q96BZ4 506 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 SIPA1Q96FS4 1042 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 GSDMAQ96QA5 445 aa12.82□□□□□ -0.36
TRAF4-202ENST00000262396 ARID3AQ99856 593 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms