RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ALKBH5Q6P6C2 394 aaKnown RBP12.12□□□□□ -0.47
PFDN1-201ENST00000261813 ZNF662Q6ZS27 426 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 KIAA1328Q86T90 577 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 TMEM110Q86TL2 294 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 TMEM35BQ8NCS4 154 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 RIN3Q8TB24 985 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 ELSPBP1Q96BH3 223 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 PPP1R13BQ96KQ4 1090 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 CALR3Q96L12 384 aaKnown RBP12.12□□□□□ -0.47
PFDN1-201ENST00000261813 LRRC3BQ96PB8 259 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 KXD1Q9BQD3 176 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 MIS12Q9H081 205 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 ZFP14Q9HCL3 533 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
PFDN1-201ENST00000261813 IGSF9Q9P2J2 1179 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 NAGPAQ9UK23 515 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 CCL26Q9Y258 94 aa12.12□□□□□ -0.47
PFDN1-201ENST00000261813 NUP210Q8TEM1 1887 aaPredicted RBP12.12□□□□□ -0.47
PFDN1-201ENST00000261813 YJEFN3A6XGL0 299 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 HEPACAM2A8MVW5 462 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 ESPNB1AK53 854 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 E7ENQ6 273 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 PAPSS1O43252 624 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-201ENST00000261813 TLR5O60602 858 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 ERBB2P04626 1255 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 CKMP06732 381 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 PLEKP08567 350 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-201ENST00000261813 RARGP13631 454 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 PFKLP17858 780 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 HDCP19113 662 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 AVPR1AP37288 418 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 MAGEA1P43355 309 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 SNX16P57768 344 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
PFDN1-201ENST00000261813 ZXDBP98169 803 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 NHLH1Q02575 133 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 KIF5AQ12840 1032 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 NAA35Q5VZE5 725 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 VITQ6UXI7 678 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 HFE2Q6ZVN8 426 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 SLC44A3Q8N4M1 653 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 MSANTD4Q8NCY6 345 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 SLC30A5Q8TAD4 765 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 IRGQQ8WZA9 623 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-201ENST00000261813 NXPE3Q969Y0 559 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 TRIM11Q96F44 468 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 PIWIL1Q96J94 861 aaKnown RBP12.11□□□□□ -0.47
PFDN1-201ENST00000261813 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 SEPT11Q9NVA2 429 aaKnown RBP12.11□□□□□ -0.47
PFDN1-201ENST00000261813 CLIC5Q9NZA1 410 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 MUTYHQ9UIF7 546 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 NUDT5Q9UKK9 219 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 PPP2R2CQ9Y2T4 447 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
PFDN1-201ENST00000261813 A0A087X0T9 212 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 MDM4O15151 490 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 NARSO43776 548 aaKnown RBP12.1□□□□□ -0.47
PFDN1-201ENST00000261813 KRT86O43790 486 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 RTN2O75298 545 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 FBXO21O94952 628 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 TBX18O95935 607 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 H2AFZP0C0S5 128 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 FAM228BP0C875 321 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 MBL2P11226 248 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-201ENST00000261813 UNGP13051 313 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-201ENST00000261813 SLC7A9P82251 487 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 GFPT1Q06210 699 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-201ENST00000261813 ZNF268Q14587 947 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-201ENST00000261813 CCDC122Q5T0U0 273 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 BSPRYQ5W0U4 402 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 FAM183BPQ6ZVS7 135 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 H2AFVQ71UI9 128 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 CCAR2Q8N163 923 aaKnown RBP12.1□□□□□ -0.47
PFDN1-201ENST00000261813 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 CPA5Q8WXQ8 436 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 VCPIP1Q96JH7 1222 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 USB1Q9BQ65 265 aaKnown RBP12.1□□□□□ -0.47
PFDN1-201ENST00000261813 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 SMPD4Q9NXE4 827 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 OBP2AQ9NY56 170 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 ARHGAP26Q9UNA1 814 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 SORCS3Q9UPU3 1222 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 CPQQ9Y646 472 aa12.1□□□□□ -0.47
PFDN1-201ENST00000261813 KIF2AO00139 706 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-201ENST00000261813 DDX3XO00571 662 aaKnown RBP eCLIP12.09□□□□□ -0.476e-8■■□□□ 14.4
PFDN1-201ENST00000261813 FYNP06241 537 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 MYBL1P10243 752 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 GABRB2P47870 512 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 MMP16P51512 607 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 VAV2P52735 878 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 USP4Q13107 963 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 TDGQ13569 410 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 GRM2Q14416 872 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 MTF1Q14872 753 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 TAF5Q15542 800 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms