RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TMEM270Q6UE05 265 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNF365Q70YC5 407 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 INTS8Q75QN2 995 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 KIF18AQ8NI77 898 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DDX47Q9H0S4 455 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 KCNK13Q9HB14 408 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 TEX264Q9Y6I9 313 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 PHF3Q92576 2039 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SIGLEC16A6NMB1 481 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 PI4K2BG5E9Z4 385 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 TTI1O43156 1089 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 TSPAN12O95859 305 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 ITIH2P19823 946 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 ARID5AQ03989 594 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 DPYSL2Q16555 572 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 QPCTQ16769 361 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 TPRG1LQ5T0D9 272 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 C11orf63Q6NUN7 778 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 ETFBKMTQ8IXQ9 262 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 HACE1Q8IYU2 909 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 OR13J1Q8NGT2 312 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 FRS2Q8WU20 508 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 ATXN2LQ8WWM7 1075 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 KCTD13Q8WZ19 329 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 TMEM176AQ96HP8 235 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 OXCT2Q9BYC2 517 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 EP300Q09472 2414 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 GOLGA6L19H0YKK7 550 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SCAMP3O14828 347 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 KRT14P02533 472 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 PDHA1P08559 390 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 CISD3P0C7P0 127 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 MXI1P50539 228 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 PMS2P54278 862 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 B4GALNT1Q00973 533 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 ITIH3Q06033 890 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 PRKD1Q15139 912 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 DDR2Q16832 855 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SRGAP1Q7Z6B7 1085 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 LRRC52Q8N7C0 313 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 HPDLQ96IR7 371 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 AP1M1Q9BXS5 423 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 FAM13BQ9NYF5 915 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 FZD10Q9ULW2 581 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.92□□□□□ -1.461e-6■■■■□ 22.9
TOPBP1-201ENST00000260810 WNT9AO14904 365 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SMAD6O43541 496 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 AKR1B10O60218 316 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 PDGFRBP09619 1106 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 MAGEA12P43365 314 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 CDKN1CP49918 316 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 APBB1IPQ7Z5R6 666 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 TAC4Q86UU9 113 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SENP8Q96LD8 212 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SLC46A2Q9BY10 475 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SEMA4AQ9H3S1 761 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 PCDH18Q9HCL0 1135 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 ARFGAP3Q9NP61 516 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 PCYOX1Q9UHG3 505 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 SFMBT1Q9UHJ3 866 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 FAM184BQ9ULE4 1060 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 TMCO5BA8MYB1 307 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 THPOP40225 353 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 CTSOP43234 321 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 CCNI2Q6ZMN8 369 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 C3orf20Q8ND61 904 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 JAKMIP2Q96AA8 810 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNF317Q96PQ6 595 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 MTG1Q9BT17 334 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 GKN1Q9NS71 199 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 TMEM74BQ9NUR3 256 aa5.92□□□□□ -1.46
TOPBP1-201ENST00000260810 MOXD2PA6NHM9 499 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 HMGB1P1B2RPK0 211 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 K7ERQ8 282 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 CAVIN2O95810 425 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 TRUB2O95900 331 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 TDGF1P13385 188 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 GOT1P17174 413 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 CYLC1P35663 651 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 IKQ13123 557 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 VARS2Q5ST30 1063 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 MFSD5Q6N075 450 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNF549Q6P9A3 640 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 SLC26A9Q7LBE3 791 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 SCML4Q8N228 414 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 MMGT1Q8N4V1 131 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 RETREG2Q8NC44 543 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 GDAP1L1Q96MZ0 367 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 PLEKHA5Q9HAU0 1116 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 ZFYVE28Q9HCC9 887 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 AVENQ9NQS1 362 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 PIH1D1Q9NWS0 290 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 LARSQ9P2J5 1176 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 CD58P19256 250 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 KCNA5P22460 613 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 ROR1Q01973 937 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 ZRSR2Q15696 482 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 TCEAL5Q5H9L2 206 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 HIBCHQ6NVY1 386 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms