RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 STRADAQ7RTN6 431 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 NT5DC3Q86UY8 548 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 MIB1Q86YT6 1006 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 TMC8Q8IU68 726 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 LEMD2Q8NC56 503 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 RNF34Q969K3 372 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 ZNF707Q96C28 371 aaPredicted RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 NAPGQ99747 312 aaPredicted RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 NCAPGQ9BPX3 1015 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 CCSER2Q9H7U1 834 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 IL21Q9HBE4 155 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 DNMT3BQ9UBC3 853 aaKnown RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 PCSK1NQ9UHG2 260 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 PACSIN2Q9UNF0 486 aaPredicted RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 JRKLQ9Y4A0 524 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 A0A1W2PRU2 124 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 CTAGE9A4FU28 777 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 ENC1O14682 589 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 MDM4O15151 490 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 LRCH4O75427 683 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 TADA3O75528 432 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 GLP2RO95838 553 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 TBX18O95935 607 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 POU2F2P09086 479 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 IL9P15248 144 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 GJA1P17302 382 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 LTBRP36941 435 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 NTHL1P78549 312 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 KCNC3Q14003 757 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 RPS6KA1Q15418 735 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 PUS10Q3MIT2 529 aaKnown RBP16.25■□□□□ 0.19
GYPC-201ENST00000259254 RAB6CQ53S08 254 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 MEI1Q5TIA1 1274 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 PTCRAQ6ISU1 281 aaPredicted RBP16.25■□□□□ 0.19
GYPC-201ENST00000259254 ANKRD54Q6NXT1 300 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 RHOT1Q8IXI2 618 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 CMASQ8NFW8 434 aaPredicted RBP16.25■□□□□ 0.19
GYPC-201ENST00000259254 SERPINB11Q96P15 392 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 LRRC3Q9BY71 257 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 RAB6CQ9H0N0 254 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 SMOC2Q9H3U7 446 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 ZWILCHQ9H900 591 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.25■□□□□ 0.19
GYPC-201ENST00000259254 SFMBT1Q9UHJ3 866 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 PTPRDP23468 1912 aa16.25■□□□□ 0.19
GYPC-201ENST00000259254 SLC12A8A0AV02 714 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 C2orf78A6NCI8 922 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 GRXCR2A6NFK2 248 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 MIF4GDA9UHW6 222 aaKnown RBP16.24■□□□□ 0.19
GYPC-201ENST00000259254 MSI1O43347 362 aaKnown RBP16.24■□□□□ 0.19
GYPC-201ENST00000259254 F9P00740 461 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 MIPP30301 263 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 PCK1P35558 622 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 ATP5C1P36542 298 aaKnown RBP16.24■□□□□ 0.19
GYPC-201ENST00000259254 ATXN1P54253 815 aaKnown RBP16.24■□□□□ 0.19
GYPC-201ENST00000259254 HDAC4P56524 1084 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 TAS2R40P59535 323 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 ADAM15Q13444 863 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 ARHGAP15Q53QZ3 475 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 ODF2Q5BJF6 829 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 OTUD1Q5VV17 481 aaPredicted RBP16.24■□□□□ 0.19
GYPC-201ENST00000259254 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 MSANTD2Q6P1R3 559 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 GAREM2Q75VX8 874 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 TMEM150AQ86TG1 271 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 FAM131BQ86XD5 332 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 UBL4BQ8N7F7 174 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 CENPIQ92674 756 aaPredicted RBP16.24■□□□□ 0.19
GYPC-201ENST00000259254 NT5C3BQ969T7 300 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 MARCH2Q9P0N8 246 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 DNMT3LQ9UJW3 386 aa16.24■□□□□ 0.19
GYPC-201ENST00000259254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.24■□□□□ 0.19
GYPC-201ENST00000259254 PLXNA3P51805 1871 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 ZNF197O14709 1029 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 IRAK2O43187 625 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 COCHO43405 550 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 TBX10O75333 385 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 ATP1A1P05023 1023 aaKnown RBP16.23■□□□□ 0.19
GYPC-201ENST00000259254 HMBSP08397 361 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 MBL2P11226 248 aaPredicted RBP16.23■□□□□ 0.19
GYPC-201ENST00000259254 TCF4P15884 667 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 TUBP50607 506 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 EPHA5P54756 1037 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 DLX2Q07687 328 aaPredicted RBP16.23■□□□□ 0.19
GYPC-201ENST00000259254 TXNDC8Q6A555 127 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 TMEM184AQ6ZMB5 413 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 SHKBP1Q8TBC3 707 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 TCEAL4Q96EI5 215 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 PSMB7Q99436 277 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 ADAM33Q9BZ11 813 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 SLITRK6Q9H5Y7 841 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 PIGVQ9NUD9 493 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 CALCOCO1Q9P1Z2 691 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 USP18Q9UMW8 372 aa16.23■□□□□ 0.19
GYPC-201ENST00000259254 MRPS23Q9Y3D9 190 aaKnown RBP16.23■□□□□ 0.19
GYPC-201ENST00000259254 PATJQ8NI35 1801 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms