RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 SOWAHDA6NJG2 315 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 F9P00740 461 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 TMEM253P0C7T8 217 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 PSMC3P17980 439 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 RING1Q06587 406 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 MAMLD1Q13495 774 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 TRIP4Q15650 581 aaPredicted RBP23.79■■□□□ 1.4
APOE-201ENST00000252486 SLC25A52Q3SY17 297 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 VITQ6UXI7 678 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 YAF2Q8IY57 180 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 NPY6RQ99463 290 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 KXD1Q9BQD3 176 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 DCLK3Q9C098 648 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 THAP2Q9H0W7 228 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 CFAP97Q9P2B7 532 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 MYO1AQ9UBC5 1043 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 TLR6Q9Y2C9 796 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 SH3BP1Q9Y3L3 701 aa23.79■■□□□ 1.4
APOE-201ENST00000252486 C2CD4BA6NLJ0 364 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 SLC9A3R1O14745 358 aaPredicted RBP23.78■■□□□ 1.4
APOE-201ENST00000252486 TRUB2O95900 331 aaKnown RBP23.78■■□□□ 1.4
APOE-201ENST00000252486 IGLV3-25P01717 112 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 CYP1A2P05177 515 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 PDGFRAP16234 1089 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 SDC4P31431 198 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 FLT3P36888 993 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 MAGEA1P43355 309 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 MTF1Q14872 753 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 CC2D1AQ6P1N0 951 aaPredicted RBP23.78■■□□□ 1.4
APOE-201ENST00000252486 TAC4Q86UU9 113 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 DNAAF5Q86Y56 855 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 LRRC8AQ8IWT6 810 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 GJD3Q8N144 294 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 NT5C3BQ969T7 300 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 PGAP3Q96FM1 320 aaPredicted RBP23.78■■□□□ 1.4
APOE-201ENST00000252486 FAM204AQ9H8W3 233 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 GKN1Q9NS71 199 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 ZNF510Q9Y2H8 683 aa23.78■■□□□ 1.4
APOE-201ENST00000252486 IRAK2O43187 625 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 SLC2A3P11169 496 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 GPD1P21695 349 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 RFC1P35251 1148 aaPredicted RBP23.77■■□□□ 1.4
APOE-201ENST00000252486 PTPN9P43378 593 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 TBX4P57082 545 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 ZXDBP98169 803 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 FCHO2Q0JRZ9 810 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 MTA1Q13330 715 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 TDGQ13569 410 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 ARHGAP29Q52LW3 1261 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 NUGGCQ68CJ6 796 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 HTR3DQ70Z44 454 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 UNC45BQ8IWX7 931 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 TXLNBQ8N3L3 684 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 EMC1Q8N766 993 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 JOSD2Q8TAC2 188 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 ADAMTS19Q8TE59 1207 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 RXFP2Q8WXD0 754 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 RSPRY1Q96DX4 576 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 MCEEQ96PE7 176 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 TRMT61BQ9BVS5 477 aaKnown RBP23.77■■□□□ 1.4
APOE-201ENST00000252486 DDIT4Q9NX09 232 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 TBC1D14Q9P2M4 693 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 UVRAGQ9P2Y5 699 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 PAXBP1Q9Y5B6 917 aa23.77■■□□□ 1.4
APOE-201ENST00000252486 TCF20Q9UGU0 1960 aaKnown RBP23.77■■□□□ 1.4
APOE-201ENST00000252486 M0QYT0 321 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 ZNF263O14978 683 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 ATMINO43313 823 aaPredicted RBP23.76■■□□□ 1.39
APOE-201ENST00000252486 STC2O76061 302 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 IGLV3-27P01718 113 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 PTMAP06454 111 aaKnown RBP23.76■■□□□ 1.39
APOE-201ENST00000252486 HARS2P49590 506 aaKnown RBP23.76■■□□□ 1.39
APOE-201ENST00000252486 SULT1E1P49888 294 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 KRT83P78385 493 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 RAD9BQ6WBX8 426 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 SND1Q7KZF4 910 aaKnown RBP eCLIP23.76■■□□□ 1.396e-10■■■■■ 41.3
APOE-201ENST00000252486 SLC44A3Q8N4M1 653 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 FNIP1Q8TF40 1166 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 OTUB2Q96DC9 234 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 CNPY3Q9BT09 278 aa23.76■■□□□ 1.39
APOE-201ENST00000252486 SPTBN5Q9NRC6 3674 aaKnown RBP23.75■■□□□ 1.39
APOE-201ENST00000252486 TMEM191CA6NGB0 347 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 CHADO15335 359 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 ARHGAP6O43182 974 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 GJB6O95452 261 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 LATS1O95835 1130 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 IRF1P10914 325 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 ZNF143P52747 638 aaPredicted RBP23.75■■□□□ 1.39
APOE-201ENST00000252486 RPL7AP62424 266 aaKnown RBP23.75■■□□□ 1.39
APOE-201ENST00000252486 DEUP1Q05D60 604 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 EIF4EBP2Q13542 120 aaPredicted RBP23.75■■□□□ 1.39
APOE-201ENST00000252486 PDGFRLQ15198 375 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 TRNP1Q6NT89 227 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 STRADAQ7RTN6 431 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 RHOT2Q8IXI1 618 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 TTC16Q8NEE8 873 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 ADAM32Q8TC27 787 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 RSAD2Q8WXG1 361 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 LRRC3BQ96PB8 259 aa23.75■■□□□ 1.39
APOE-201ENST00000252486 NCAPGQ9BPX3 1015 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms