RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 C6orf203Q9P0P8 240 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 KIAA1257Q9ULG3 409 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 A6NJR5 290 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 FCHO1O14526 889 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CHADO15335 359 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TNFAIP8O95379 198 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 C22orf31O95567 290 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 OATP04181 439 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 EPHB2P29323 1055 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ADSLP30566 484 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 FOXN2P32314 431 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 GJA5P36382 358 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 FDFT1P37268 417 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 RFC5P40937 340 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 RAP1GDS1P52306 607 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TNFAIP2Q03169 654 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 XKR3Q5GH77 459 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SEPT14Q6ZU15 432 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 C4orf33Q8N1A6 199 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CCDC33Q8N5R6 958 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CXCL16Q9H2A7 254 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TXNRD2Q9NNW7 524 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MKS1Q9NXB0 559 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CHORDC1Q9UHD1 332 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 XPO7Q9UIA9 1087 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SRCAPQ6ZRS2 3230 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ANKRD36A6QL64 1941 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SIGLEC16A6NMB1 481 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 GSC2O15499 205 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PEX11AO75192 247 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SRGAP2BP0DMP2 458 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 THRAP10827 490 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 COG7P83436 770 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 EMC2Q15006 297 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 KBTBD12Q3ZCT8 623 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TAPT1Q6NXT6 567 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ADGRD1Q6QNK2 874 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM130Q8N3G9 435 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 B4GALNT2Q8NHY0 566 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 GANCQ8TET4 914 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 C10orf82Q8WW14 230 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PRCCQ92733 491 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 NT5C3BQ969T7 300 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ELMO3Q96BJ8 720 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ZBTB45Q96K62 511 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PEBP4Q96S96 227 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SH2D3AQ9BRG2 576 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 C1orf21Q9H246 121 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MINDY3Q9H8M7 445 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 JPH1Q9HDC5 661 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 RNF146Q9NTX7 359 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 DNAJC17Q9NVM6 304 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 GPRC5DQ9NZD1 345 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 AGO2Q9UKV8 859 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PRPF19Q9UMS4 504 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 VWA8A3KMH1 1905 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 K7ERI5 159 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 DDX39AO00148 427 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 DPYSL4O14531 572 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SLC22A2O15244 555 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TOM1L1O75674 476 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PENKP01210 267 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 HLA-DRAP01903 254 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ERBB2P04626 1255 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SERPINA6P08185 405 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 DNAJB2P25686 324 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CCNHP51946 323 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 NUP107P57740 925 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 RPL7AP62424 266 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 NKX3-2P78367 333 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ART3Q13508 389 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CNGA3Q16281 694 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 BOLA3Q53S33 107 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TMCO4Q5TGY1 634 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 KRT80Q6KB66 452 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM270Q6UE05 265 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MAEAQ7L5Y9 396 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TRMT1LQ7Z2T5 733 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 WDR49Q8IV35 697 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TRIML2Q8N7C3 387 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CHST13Q8NET6 341 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 AFG1LQ8WV93 481 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 FAR2Q96K12 515 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 FAM193BQ96PV7 902 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TTC1Q99614 292 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MSTO1Q9BUK6 570 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MRPS26Q9BYN8 205 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 KCNK13Q9HB14 408 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 NMRK1Q9NWW6 199 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 HESX1Q9UBX0 185 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 GGT7Q9UJ14 662 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PAIP2BQ9ULR5 123 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 DTNAQ9Y4J8 743 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 WDR91A4D1P6 747 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 GMNNO75496 209 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MCF2P10911 925 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 MYL2P10916 166 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 TGM2P21980 687 aa4.28□□□□□ -1.72
UBE4A-201ENST00000252108 EIF4BP23588 611 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms