RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 hCG_1818297A0A087WSY0 165 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 C2CD2LO14523 706 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 LYPLA1O75608 230 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TRUB2O95900 331 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CTSHP09668 335 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 FAM83AQ86UY5 434 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 DIS3LQ8TF46 1054 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PPP2R3CQ969Q6 453 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 FAM136AQ96C01 138 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CCDC90BQ9GZT6 254 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 MTFR1LQ9H019 292 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 WRAP73Q9P2S5 460 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PTPN20Q4JDL3 420 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TTC39CQ8N584 583 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TNIP3Q96KP6 325 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TRIM15Q9C019 465 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 A1CFQ9NQ94 594 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 COL20A1Q9P218 1284 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SERPINE1P05121 402 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 GJB1P08034 283 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 BNIP1Q12981 228 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 MPP2Q14168 576 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SPOUT1Q5T280 376 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 LRRC38Q5VT99 294 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CRELD2Q6UXH1 353 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CATSPER1Q8NEC5 780 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 EDEM1Q92611 657 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 EBNA1BP2Q99848 306 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NAT9Q9BTE0 207 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 THAP1Q9NVV9 213 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TSPAN16Q9UKR8 245 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ATP8B3O60423 1300 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 HMBSP08397 361 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NFICP08651 508 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NCAM1P13591 858 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NFIL3Q16649 462 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 KCNT2Q6UVM3 1135 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 C12orf56Q8IXR9 622 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 COPS5Q92905 334 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF317Q96PQ6 595 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ACSS2Q9NR19 701 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 DDX18Q9NVP1 670 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SNX5Q9Y5X3 404 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 AK5Q9Y6K8 562 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 DPPA5A6NC42 116 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ACKR2O00590 384 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TM9SF1O15321 606 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 MGRN1O60291 552 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PROCP04070 461 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 RBBP7Q16576 425 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 KYAT1Q16773 422 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 BBS5Q8N3I7 341 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 C12orf29Q8N999 325 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 GLIS1Q8NBF1 620 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 MAGEC3Q8TD91 643 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 DCDC2Q9UHG0 476 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ACTL7BQ9Y614 415 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SMAPO00193 183 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 VWA5AO00534 786 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PHGDHO43175 533 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 FKBP6O75344 327 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SMNDC1O75940 238 aaKnown RBP eCLIP4.75□□□□□ -1.651e-7■□□□□ 9.2
VPS13C-201ENST00000249837 MTA2O94776 668 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ETFBP38117 255 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PDK2Q15119 407 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SLC15A2Q16348 729 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SEL1L3Q68CR1 1132 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ATPAF2Q8N5M1 289 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TFAP2BQ92481 460 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 MPP4Q96JB8 637 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 FRMD8Q9BZ67 464 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 LRMDAQ9H2I8 198 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 KCNK4Q9NYG8 393 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ERAP1Q9NZ08 941 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PLA2G4CQ9UP65 541 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ORC6Q9Y5N6 252 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TJP1Q07157 1748 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 E5RJQ4 531 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 M0QYT0 321 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PTGER2P43116 358 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ACADSBP45954 432 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 MAPRE2Q15555 327 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 KHDC1Q4VXA5 237 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 FAM183BPQ6ZVS7 135 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 KYQ8NBH2 561 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NRBF2Q96F24 287 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CLIC5Q9NZA1 410 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NOCTQ9UK39 431 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 RUVBL2Q9Y230 463 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ASB14A6NK59 587 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TBC1D12O60347 775 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 C4BPAP04003 597 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 HSD17B4P51659 736 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CRY2Q49AN0 593 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 BNC2Q6ZN30 1099 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 AMIGO3Q86WK7 504 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 APPL2Q8NEU8 664 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF516Q92618 1163 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 HERPUD2Q9BSE4 406 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 DENND2DQ9H6A0 471 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms