RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 M0QZ92 97 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 CHRNA1P02708 482 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 CLCNKBP51801 687 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 MAP3K7CLP57077 242 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 SLC8A3P57103 927 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 MRPS5P82675 430 aaKnown RBP22.47■■□□□ 1.19
CLN6-201ENST00000249806 SPARCL1Q14515 664 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 NCBP2-AS2Q69YL0 99 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 SPATA21Q7Z572 469 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 SAPCD2Q86UD0 394 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 CYTH2Q99418 400 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 DTLQ9NZJ0 730 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 MYO18AQ92614 2054 aaKnown RBP22.47■■□□□ 1.19
CLN6-201ENST00000249806 SLC18A1P54219 525 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 DNAJC3Q13217 504 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 SLC45A4Q5BKX6 768 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 OTUD1Q5VV17 481 aaPredicted RBP22.47■■□□□ 1.19
CLN6-201ENST00000249806 SYPL2Q5VXT5 272 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 RGMBQ6NW40 437 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 HFE2Q6ZVN8 426 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 CFAP36Q96G28 342 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 PITPNM3Q9BZ71 974 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 ZFYVE28Q9HCC9 887 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 CRTAC1Q9NQ79 661 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 FZD10Q9ULW2 581 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 USP3Q9Y6I4 520 aa22.47■■□□□ 1.19
CLN6-201ENST00000249806 SUN1O94901 812 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 GHRP10912 638 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 PRPF39Q86UA1 669 aaKnown RBP22.46■■□□□ 1.19
CLN6-201ENST00000249806 CDKL3Q8IVW4 592 aaPredicted RBP22.46■■□□□ 1.19
CLN6-201ENST00000249806 C3orf58Q8NDZ4 430 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 MTG1Q9BT17 334 aaPredicted RBP22.46■■□□□ 1.19
CLN6-201ENST00000249806 C12orf65Q9H3J6 166 aaKnown RBP22.46■■□□□ 1.19
CLN6-201ENST00000249806 LRRC4Q9HBW1 653 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 TRPV2Q9Y5S1 764 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 TSHRP16473 764 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 ZFXP17010 805 aaPredicted RBP22.46■■□□□ 1.19
CLN6-201ENST00000249806 MTFR1Q15390 333 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 FAM133BQ5BKY9 247 aaKnown RBP22.46■■□□□ 1.19
CLN6-201ENST00000249806 CNPY4Q8N129 248 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 PAAF1Q9BRP4 392 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 SLCO1B3Q9NPD5 702 aa22.46■■□□□ 1.19
CLN6-201ENST00000249806 THP07101 528 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 IBSPP21815 317 aaPredicted RBP22.45■■□□□ 1.18
CLN6-201ENST00000249806 NR2C2P49116 596 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 NME3Q13232 169 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 XRCC4Q13426 336 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 LVRNQ6Q4G3 990 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 KCNK16Q96T55 309 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 ARHGAP39Q9C0H5 1083 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 KRT82Q9NSB4 513 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 PRKAG3Q9UGI9 489 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 SCN10AQ9Y5Y9 1956 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 M0QYT0 321 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 GCATO75600 419 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 ARL4AP40617 200 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 TKTL1P51854 596 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 GJA9P57773 515 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 SIX6OS1Q8N1H7 587 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 THOC1Q96FV9 657 aaKnown RBP22.45■■□□□ 1.18
CLN6-201ENST00000249806 LGMNQ99538 433 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 AGO3Q9H9G7 860 aaKnown RBP22.45■■□□□ 1.18
CLN6-201ENST00000249806 TMEM30AQ9NV96 361 aa22.45■■□□□ 1.18
CLN6-201ENST00000249806 MYBPHLA2RUH7 354 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 ARL5CA6NH57 179 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 NRP1O14786 923 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 DAB1O75553 588 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 NOS2P35228 1153 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 PTK7Q13308 1070 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 HHATQ5VTY9 493 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 VPS52Q8N1B4 723 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 KCTD13Q8WZ19 329 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 NT5C3BQ969T7 300 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 NPY6RQ99463 290 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 TRIM56Q9BRZ2 755 aaKnown RBP22.44■■□□□ 1.18
CLN6-201ENST00000249806 PLAC1Q9HBJ0 212 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 SLC38A7Q9NVC3 462 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 ARL2BPQ9Y2Y0 163 aa22.44■■□□□ 1.18
CLN6-201ENST00000249806 F5H423 210 aaPredicted RBP22.43■■□□□ 1.18
CLN6-201ENST00000249806 FAM155BO75949 473 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 GRIA1P42261 906 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 MAGEA6P43360 314 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 SCNN1GP51170 649 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 CACNA2D1P54289 1103 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 PDK4Q16654 411 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 HEATR6Q6AI08 1181 aaKnown RBP22.43■■□□□ 1.18
CLN6-201ENST00000249806 CTU1Q7Z7A3 348 aaKnown RBP22.43■■□□□ 1.18
CLN6-201ENST00000249806 RNF169Q8NCN4 708 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 SLC44A1Q8WWI5 657 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 TRIB2Q92519 343 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 QKIQ96PU8 341 aaKnown RBP eCLIP22.43■■□□□ 1.18
CLN6-201ENST00000249806 SENP6Q9GZR1 1112 aaPredicted RBP22.43■■□□□ 1.18
CLN6-201ENST00000249806 POPDC2Q9HBU9 364 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 ARHGEF4Q9NR80 690 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.43■■□□□ 1.184e-7■■■■■ 28.5
CLN6-201ENST00000249806 ZC3H7BQ9UGR2 993 aaKnown RBP22.43■■□□□ 1.18
CLN6-201ENST00000249806 GABRQQ9UN88 632 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 HTTP42858 3142 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 CASTOR2A6NHX0 329 aa22.43■■□□□ 1.18
CLN6-201ENST00000249806 C1QAP02745 245 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms