RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CDC42EP1Q00587 391 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 CDHR3Q6ZTQ4 885 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 ARCQ7LC44 396 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 NLRP9Q7RTR0 991 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 LRRC6Q86X45 466 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 MPP5Q8N3R9 675 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 MCUQ8NE86 351 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 NDRG1Q92597 394 aaKnown RBP20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 SYT17Q9BSW7 474 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 UGT1A7Q9HAW7 530 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 UGT1A10Q9HAW8 530 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 UGT1A8Q9HAW9 530 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 GDAP2Q9NXN4 497 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 GTF2IRD1Q9UHL9 959 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 DOCK3Q8IZD9 2030 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 TRIM49D1C9J1S8 452 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 C2CD2LO14523 706 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 GRIA1P42261 906 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 SNX17Q15036 470 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 TTC39BQ5VTQ0 682 aaPredicted RBP20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 NCBP2-AS2Q69YL0 99 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 UNC5AQ6ZN44 842 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 VPS52Q8N1B4 723 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 AGAP11Q8TF27 550 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 DTLQ9NZJ0 730 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 DCTN4Q9UJW0 460 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 USP3Q9Y6I4 520 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 CD4P01730 458 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 GOT1P17174 413 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 AMPD1P23109 780 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 SCNN1AP37088 669 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 UBXN11Q5T124 520 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 FYB2Q5VWT5 728 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 TTC17Q96AE7 1141 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 SIGLEC10Q96LC7 697 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 QKIQ96PU8 341 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 PTPN18Q99952 460 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 SNX25Q9H3E2 840 aa20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 GNEQ9Y223 722 aaKnown RBP20.23■□□□□ 0.83
CDC42EP1-201ENST00000249014 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 APOEP02649 317 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 IBSPP21815 317 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 NR2C2P49116 596 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 ADAM17P78536 824 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 PCBP1Q15365 356 aaKnown RBP eCLIP20.22■□□□□ 0.838e-7■■■■□ 21
CDC42EP1-201ENST00000249014 TRMT10BQ6PF06 316 aaKnown RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 CHSY1Q86X52 802 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 APPL2Q8NEU8 664 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 LRMDAQ9H2I8 198 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.22■□□□□ 0.831e-6■■□□□ 12.3
CDC42EP1-201ENST00000249014 ZNF180Q9UJW8 692 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 L3MBTL1Q9Y468 752 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 MYO18AQ92614 2054 aaKnown RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 TRDMT1O14717 391 aaKnown RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 CBX6O95503 412 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 CSH1P0DML2 217 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 CSH2P0DML3 217 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 ZFXP17010 805 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 TAF1BQ53T94 588 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 XKR4Q5GH76 650 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 LIMS2Q7Z4I7 341 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 FAM131BQ86XD5 332 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 ZNF398Q8TD17 642 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 SLC7A6OSQ96CW6 309 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 LRRC39Q96DD0 335 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 ZNF560Q96MR9 790 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 TSSK1BQ9BXA7 367 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 SCN4AP35499 1836 aa20.22■□□□□ 0.83
CDC42EP1-201ENST00000249014 TREHO43280 583 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 ATP5HO75947 161 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 SNRPAP09012 282 aaKnown RBP20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 TROVE2P10155 538 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 KCNE1P15382 129 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 VAV1P15498 845 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 BGNP21810 368 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 ACADSBP45954 432 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 TAF6P49848 677 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 PITX1P78337 314 aaPredicted RBP20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 MFSD10Q14728 455 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 PRKD1Q15139 912 aaPredicted RBP20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 FAM110CQ1W6H9 321 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 ZNF449Q6P9G9 518 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 C4orf22Q6V702 233 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 MTDHQ86UE4 582 aaKnown RBP20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 OSTM1Q86WC4 334 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 DEFB106AQ8N104 65 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 ARRDC4Q8NCT1 418 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 HSFY1Q96LI6 401 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 SRPK1Q96SB4 655 aaKnown RBP20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 TMPRSS4Q9NRS4 437 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 MAD1L1Q9Y6D9 718 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 GLTPD2A6NH11 291 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 TPSB2P20231 275 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 AXLP30530 894 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 MATKP42679 507 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 BMPR2Q13873 1038 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 TPSAB1Q15661 275 aa20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 HEATR6Q6AI08 1181 aaKnown RBP20.21■□□□□ 0.83
CDC42EP1-201ENST00000249014 STRADAQ7RTN6 431 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms