RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 OTUD6AQ7L8S5 288 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ARHGEF19Q8IW93 802 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 RPUSD2Q8IZ73 545 aaKnown RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ZSWIM1Q9BR11 485 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 PLCD4Q9BRC7 762 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ERP44Q9BS26 406 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 TXLNGYQ9BZA5 131 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 TMEM117Q9H0C3 514 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 IFT22Q9H7X7 185 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 TMEM8AQ9HCN3 771 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 PXMP2Q9NR77 195 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ZNF277Q9NRM2 450 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 TAS2R14Q9NYV8 317 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 B4GALT6Q9UBX8 382 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 PCYOX1Q9UHG3 505 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 NOCTQ9UK39 431 aaKnown RBP8.35□□□□□ -1.07
CXCR4-201ENST00000241393 GTF3C4Q9UKN8 822 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 ALG6Q9Y672 507 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 COL4A5P29400 1685 aa8.35□□□□□ -1.07
CXCR4-201ENST00000241393 A0A087WUV0 522 aaPredicted RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 SLC12A8A0AV02 714 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PODXLO00592 558 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 KIAA0391O15091 583 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PHF2O75151 1096 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 STAM2O75886 525 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CYP1A2P05177 515 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 NUDT17P0C025 328 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 RPS12P25398 132 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 LSP1P33241 339 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CTNNA1P35221 906 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 MDH1P40925 334 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 GCLMP48507 274 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CCT5P48643 541 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PEX3P56589 373 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 DLG4P78352 724 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CXCL9Q07325 125 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 ZNF844Q08AG5 666 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 SPP2Q13103 211 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 DMP1Q13316 513 aaPredicted RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 SLC9A5Q14940 896 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 TRADDQ15628 312 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 SNRNP35Q16560 246 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CYP1B1Q16678 543 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 STEAP3Q658P3 488 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CIAPIN1Q6FI81 312 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 MICALCLQ6ZW33 695 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 DNAAF5Q86Y56 855 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PALB2Q86YC2 1186 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 ABI1Q8IZP0 508 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 TMEM161BQ8NDZ6 487 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 MCPH1Q8NEM0 835 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PARD3BQ8TEW8 1205 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 ATP8B4Q8TF62 1192 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PPM1EQ8WY54 764 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 ATP6V0A1Q93050 837 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 ZBTB9Q96C00 473 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CDHR1Q96JP9 859 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 TEPSINQ96N21 525 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 TAAR1Q96RJ0 339 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CAMKK2Q96RR4 588 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 RMDN3Q96TC7 470 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 FMO2Q99518 471 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 BOCQ9BWV1 1114 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 MOV10L1Q9BXT6 1211 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 SMOC1Q9H4F8 434 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PCIF1Q9H4Z3 704 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 MYOZ2Q9NPC6 264 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 SEPT11Q9NVA2 429 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CTTNBP2NLQ9P2B4 639 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 PPARGC1AQ9UBK2 798 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 LCMT1Q9UIC8 334 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 FBXL7Q9UJT9 491 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 DSEQ9UL01 958 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 TBX20Q9UMR3 447 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 COG5Q9UP83 839 aa8.34□□□□□ -1.07
CXCR4-201ENST00000241393 APOBEC2Q9Y235 224 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 YBX2Q9Y2T7 364 aaKnown RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 CTDP1Q9Y5B0 961 aaPredicted RBP8.34□□□□□ -1.07
CXCR4-201ENST00000241393 NFASCO94856 1347 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 NDUFAB1O14561 156 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 SLC16A4O15374 487 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CCNE2O96020 404 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 F2P00734 622 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 NTRK1P04629 796 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 PAEPP09466 180 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CHRNB2P17787 502 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 KCNA3P22001 575 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CCND2P30279 289 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 NPTX2P47972 431 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CDR1P51861 262 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 IL2P60568 153 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CDR2Q01850 454 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 GCNT1Q02742 428 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 PDCLQ13371 301 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 PCBP1Q15365 356 aaKnown RBP eCLIP8.34□□□□□ -1.08
CXCR4-201ENST00000241393 PTGISQ16647 500 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 BRDTQ58F21 947 aaPredicted RBP8.34□□□□□ -1.08
CXCR4-201ENST00000241393 XKR9Q5GH70 373 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 EMC4Q5J8M3 183 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms