RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 PPP1R26Q5T8A7 1209 aaPredicted RBP13.38□□□□□ -0.27
PDZD11-201ENST00000239666 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 RSRC2Q7L4I2 434 aaKnown RBP13.38□□□□□ -0.27
PDZD11-201ENST00000239666 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 ZNF557Q8N988 423 aaPredicted RBP13.38□□□□□ -0.27
PDZD11-201ENST00000239666 WHAMMQ8TF30 809 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 KLF16Q9BXK1 252 aaPredicted RBP13.38□□□□□ -0.27
PDZD11-201ENST00000239666 IRX2Q9BZI1 471 aaPredicted RBP13.38□□□□□ -0.27
PDZD11-201ENST00000239666 LRRC4Q9HBW1 653 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 HHLA1C9JL84 531 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 XPO1O14980 1071 aaKnown RBP13.37□□□□□ -0.27
PDZD11-201ENST00000239666 BEST1O76090 585 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 PAEPP09466 180 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 SETSIPP0DME0 302 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 RAD23BP54727 409 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 BST2Q10589 180 aaKnown RBP13.37□□□□□ -0.27
PDZD11-201ENST00000239666 LPAL2Q16609 132 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 AASDHQ4L235 1098 aaPredicted RBP13.37□□□□□ -0.27
PDZD11-201ENST00000239666 ZNF394Q53GI3 561 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 IL31Q6EBC2 164 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 GRAMD4Q6IC98 578 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 SMYD4Q8IYR2 804 aaPredicted RBP13.37□□□□□ -0.27
PDZD11-201ENST00000239666 SLC4A11Q8NBS3 891 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 ARMC2Q8NEN0 867 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 EPS8L1Q8TE68 723 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 UCMAQ8WVF2 138 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 GOLGA1Q92805 767 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 IPO9Q96P70 1041 aaKnown RBP13.37□□□□□ -0.27
PDZD11-201ENST00000239666 TRIM62Q9BVG3 475 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 BBS2Q9BXC9 721 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 HMGXB4Q9UGU5 601 aa13.37□□□□□ -0.27
PDZD11-201ENST00000239666 FRYLO94915 3013 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 GFRA2O00451 464 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 SLC30A4O14863 429 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 TIMM44O43615 452 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 CACNG3O60359 315 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 ZNF217O75362 1048 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 TULP3O75386 442 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 ZBED1O96006 694 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 TGM1P22735 817 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 GBP1P32455 592 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 FMO5P49326 533 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 HARS2P49590 506 aaKnown RBP13.36□□□□□ -0.27
PDZD11-201ENST00000239666 DMWDQ09019 674 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 ORC1Q13415 861 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 PLK5Q496M5 336 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 PM20D1Q6GTS8 502 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 SLC36A4Q6YBV0 504 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 RABEPKQ7Z6M1 372 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 BBS7Q8IWZ6 715 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 ETFBKMTQ8IXQ9 262 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 SCML4Q8N228 414 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 ZNF513Q8N8E2 541 aaPredicted RBP13.36□□□□□ -0.27
PDZD11-201ENST00000239666 TERB1Q8NA31 727 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 RNF139Q8WU17 664 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 SLC35C1Q96A29 364 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 HHIPQ96QV1 700 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 TWNKQ96RR1 684 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 SLC2A11Q9BYW1 496 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 ARRDC1-AS1Q9H2J1 176 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 ABCC13Q9NSE7 274 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 BCCIPQ9P287 314 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDZD11-201ENST00000239666 MYO16Q9Y6X6 1858 aa13.36□□□□□ -0.27
PDZD11-201ENST00000239666 A0A1W2PQH9 124 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 CYP26A1O43174 497 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 SART1O43290 800 aaKnown RBP13.35□□□□□ -0.27
PDZD11-201ENST00000239666 KLF8O95600 359 aaPredicted RBP13.35□□□□□ -0.27
PDZD11-201ENST00000239666 LATS1O95835 1130 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 IRF1P10914 325 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 TYRP14679 529 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 CD19P15391 556 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 NTSR1P30989 418 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 KIR2DL1P43626 348 aaPredicted RBP13.35□□□□□ -0.27
PDZD11-201ENST00000239666 DGKGP49619 791 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 TKTL1P51854 596 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
PDZD11-201ENST00000239666 SEC13P55735 322 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 GCNT1Q02742 428 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 PKN3Q6P5Z2 889 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 LPCAT2Q7L5N7 544 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 ENOSF1Q7L5Y1 443 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 PIGZQ86VD9 579 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 TMEM25Q86YD3 366 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 IL17RCQ8NAC3 791 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 TXNDC5Q8NBS9 432 aaKnown RBP13.35□□□□□ -0.27
PDZD11-201ENST00000239666 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 PLD4Q96BZ4 506 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 CHAMP1Q96JM3 812 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 CNGB3Q9NQW8 809 aa13.35□□□□□ -0.27
PDZD11-201ENST00000239666 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
PDZD11-201ENST00000239666 HBS1LQ9Y450 684 aaKnown RBP13.35□□□□□ -0.27
PDZD11-201ENST00000239666 KIAA1549LQ6ZVL6 1849 aa13.34□□□□□ -0.27
PDZD11-201ENST00000239666 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.34□□□□□ -0.27
PDZD11-201ENST00000239666 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
PDZD11-201ENST00000239666 FBXO21O94952 628 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms