RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PROCP04070 461 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 IL4RP24394 825 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 ZNF143P52747 638 aaPredicted RBP16.04■□□□□ 0.16
DDX55-201ENST00000238146 TRNP1Q6NT89 227 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 NAT14Q8WUY8 206 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 CCDC124Q96CT7 223 aaKnown RBP16.04■□□□□ 0.16
DDX55-201ENST00000238146 OPTNQ96CV9 577 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 DTNBP1Q96EV8 351 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 OGTO15294 1046 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 ZBED1O96006 694 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 FGF3P11487 239 aaPredicted RBP16.04■□□□□ 0.16
DDX55-201ENST00000238146 MAGEA3P43357 314 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 RPL10AP62906 217 aaKnown RBP16.04■□□□□ 0.16
DDX55-201ENST00000238146 FAM102AQ5T9C2 384 aaPredicted RBP16.04■□□□□ 0.16
DDX55-201ENST00000238146 ATG14Q6ZNE5 492 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 TIFABQ6ZNK6 161 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 ZNF534Q76KX8 674 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 MAVSQ7Z434 540 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 ACTRT2Q8TDY3 377 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 EBNA1BP2Q99848 306 aaKnown RBP16.04■□□□□ 0.16
DDX55-201ENST00000238146 ADPGKQ9BRR6 497 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 SHCBP1LQ9BZQ2 653 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 CDH22Q9UJ99 828 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 CPSF3Q9UKF6 684 aaKnown RBP16.04■□□□□ 0.16
DDX55-201ENST00000238146 ITGA11Q9UKX5 1188 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 EMCNQ9ULC0 261 aa16.04■□□□□ 0.16
DDX55-201ENST00000238146 A6NJR5 290 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 CSDE1O75534 798 aaKnown RBP16.03■□□□□ 0.16
DDX55-201ENST00000238146 HMGCRP04035 888 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 GABRB2P47870 512 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 SLC1A6P48664 564 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 SERPINB9P50453 376 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 XIAPP98170 497 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 C15orf59Q2T9L4 293 aaPredicted RBP16.03■□□□□ 0.16
DDX55-201ENST00000238146 NCAPG2Q86XI2 1143 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 NME8Q8N427 588 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 PQLC3Q8N755 202 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 MCUQ8NE86 351 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 TWNKQ96RR1 684 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 STN1Q9H668 368 aaKnown RBP16.03■□□□□ 0.16
DDX55-201ENST00000238146 SPATA31D3P0C874 917 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 KCNA4P22459 653 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 MMEL1Q495T6 779 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 SPATA31D4Q6ZUB0 917 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 TTLL6Q8N841 843 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 HIPK4Q8NE63 616 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 JADE3Q92613 823 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 CNPY3Q9BT09 278 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
DDX55-201ENST00000238146 NIFKQ9BYG3 293 aaKnown RBP16.03■□□□□ 0.16
DDX55-201ENST00000238146 CYP4F11Q9HBI6 524 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 HMGXB4Q9UGU5 601 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 POMPQ9Y244 141 aa16.03■□□□□ 0.16
DDX55-201ENST00000238146 BCLAF3A2AJT9 711 aaKnown RBP16.02■□□□□ 0.16
DDX55-201ENST00000238146 MICAL2O94851 1124 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 BCAR1P56945 870 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 PDK3Q15120 406 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 TRIP10Q15642 601 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 DBN1Q16643 649 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 TBC1D25Q3MII6 688 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 SNRNP48Q6IEG0 339 aaKnown RBP16.02■□□□□ 0.16
DDX55-201ENST00000238146 SATL1Q86VE3 508 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 CCDC33Q8N5R6 958 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 DEPDC1BQ8WUY9 529 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 RXFP2Q8WXD0 754 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 ACO2Q99798 780 aaKnown RBP16.02■□□□□ 0.16
DDX55-201ENST00000238146 PRPSAP2O60256 369 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 METTL18O95568 372 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 GPD1P21695 349 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 IDH3AP50213 366 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 KRT81Q14533 505 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 SURF1Q15526 300 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 CDO1Q16878 200 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 PABPC1LQ4VXU2 614 aaKnown RBP16.02■□□□□ 0.16
DDX55-201ENST00000238146 LRRC23Q53EV4 343 aaPredicted RBP16.02■□□□□ 0.16
DDX55-201ENST00000238146 N4BP2L1Q5TBK1 243 aaPredicted RBP16.02■□□□□ 0.16
DDX55-201ENST00000238146 RSPH3Q86UC2 560 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 HPS6Q86YV9 775 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 EFCAB3Q8N7B9 438 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 FAM81AQ8TBF8 368 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 PRPF31Q8WWY3 499 aaKnown RBP16.02■□□□□ 0.16
DDX55-201ENST00000238146 PNPOQ9NVS9 261 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 GPATCH2LQ9NWQ4 482 aa16.02■□□□□ 0.16
DDX55-201ENST00000238146 C2CD4BA6NLJ0 364 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 OR6B1O95007 311 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 RAG1P15918 1043 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 PDGFRAP16234 1089 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 SERPINB6P35237 376 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 GRIA1P42261 906 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 GPD2P43304 727 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 PTPN11Q06124 597 aaPredicted RBP16.02■□□□□ 0.15
DDX55-201ENST00000238146 STXBP5Q5T5C0 1151 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 FBXL19Q6PCT2 694 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 UGT2A3Q6UWM9 527 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 UNC5BQ8IZJ1 945 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 DEFB107AQ8IZN7 70 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 TMEM130Q8N3G9 435 aa16.02■□□□□ 0.15
DDX55-201ENST00000238146 PCDH19Q8TAB3 1148 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms