RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 HABP4Q5JVS0 413 aaKnown RBP11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 ANKRD54Q6NXT1 300 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 DENND1CQ8IV53 801 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 BBS5Q8N3I7 341 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 WDTC1Q8N5D0 677 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZMIZ2Q8NF64 920 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 SPON2Q9BUD6 331 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 CCSER2Q9H7U1 834 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF510Q9Y2H8 683 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
TNFAIP3-201ENST00000237289 SCAMP3O14828 347 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 MSI1O43347 362 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 TBX18O95935 607 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 HOXA9P31269 272 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 LMAN1P49257 510 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 CACNA2D1P54289 1103 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 NTHL1P78549 312 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 LIMS2Q7Z4I7 341 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 TBC1D14Q9P2M4 693 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 AP4E1Q9UPM8 1137 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 TTLL3Q9Y4R7 772 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 TMEM191CA6NGB0 347 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 H0Y626 953 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 ATF6P18850 670 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 CDH18Q13634 790 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 KCNT1Q5JUK3 1230 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 ERMARDQ5T6L9 678 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 TMA16Q96EY4 203 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 DDX23Q9BUQ8 820 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 KLHL11Q9NVR0 708 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 HCFC1R1Q9NWW0 138 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 HBS1LQ9Y450 684 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 NR2E1Q9Y466 385 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 SERPINB6P35237 376 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 GTF2F1P35269 517 aaKnown RBP eCLIP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 NNMTP40261 264 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 USP46P62068 366 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF177Q13360 481 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 STRADAQ7RTN6 431 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 RCOR2Q8IZ40 523 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 TDRD5Q8NAT2 981 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 CDX2Q99626 313 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 GOLPH3Q9H4A6 298 aa11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 PACSIN2Q9UNF0 486 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF840PA6NDX5 716 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 H7C0C1 242 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 PJA2O43164 708 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 TJP3O95049 919 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 MIPP30301 263 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 GABRB2P47870 512 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 ATP5OP48047 213 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 BRMS1LQ5PSV4 323 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 OLFML1Q6UWY5 402 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 HFE2Q6ZVN8 426 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 ADAT2Q7Z6V5 191 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 PI4K2BG5E9Z4 385 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 TSPAN3O60637 253 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZFXP17010 805 aaPredicted RBP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 ASTE1Q2TB18 679 aaPredicted RBP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 DPY19L2P1Q6NXN4 242 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZSCAN18Q8TBC5 510 aaPredicted RBP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 PBKQ96KB5 322 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 TDP1Q9NUW8 608 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 CYTH4Q9UIA0 394 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 NME7Q9Y5B8 376 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 SCN1AP35498 2009 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 HYAL1Q12794 435 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 TPGS1Q6ZTW0 290 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 TAC4Q86UU9 113 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 LGI2Q8N0V4 545 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 FNIP1Q8TF40 1166 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 HEMGNQ9BXL5 484 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 FSCN2O14926 492 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 CORO1AP31146 461 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 SH3RF2Q8TEC5 729 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 XPO6Q96QU8 1125 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 CYP2S1Q96SQ9 504 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 HEY1Q9Y5J3 304 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 CLUHO75153 1309 aa11.55□□□□□ -0.56
TNFAIP3-201ENST00000237289 C2CD4BA6NLJ0 364 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 PSTPIP1O43586 416 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 LCA5LO95447 670 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CXCR5P32302 372 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 PTPN9P43378 593 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 SYPL2Q5VXT5 272 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 C11orf63Q6NUN7 778 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 LILRA6Q6PI73 481 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 RNF168Q8IYW5 571 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CELF5Q8N6W0 485 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 VN1R2Q8NFZ6 395 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 E2F7Q96AV8 911 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 PLD4Q96BZ4 506 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 TRMT2BQ96GJ1 504 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms