RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 RNF34Q969K3 372 aa10.07□□□□□ -0.8
TRIM23-201ENST00000231524 FAM136AQ96C01 138 aa10.07□□□□□ -0.8
TRIM23-201ENST00000231524 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
TRIM23-201ENST00000231524 TRIM15Q9C019 465 aa10.07□□□□□ -0.8
TRIM23-201ENST00000231524 MYOCOSA0A1B0GUC4 107 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SIN3BO75182 1162 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 DLDP09622 509 aaKnown RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 IVDP26440 423 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 KRT76Q01546 638 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SLC15A2Q16348 729 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SEL1L3Q68CR1 1132 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 PID1Q7Z2X4 250 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 CHSY1Q86X52 802 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 LRRN4Q8WUT4 740 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 CD101Q93033 1021 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SGF29Q96ES7 293 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 VCPIP1Q96JH7 1222 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 C7orf26Q96N11 449 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 FRMD8Q9BZ67 464 aaPredicted RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SSU72Q9NP77 194 aaKnown RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 DNAJB4Q9UDY4 337 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 DAPK2Q9UIK4 370 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 V9GYQ6 96 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 ROBO1Q9Y6N7 1651 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 ZC3H11AO75152 810 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 E2F6O75461 281 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 BPGMP07738 259 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 CCDC130P13994 396 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SHMT1P34896 483 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 RGS7P49802 495 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 DUOXA2Q1HG44 320 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 NPNTQ6UXI9 565 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 NCAPG2Q86XI2 1143 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 FBXO27Q8NI29 283 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 EXT2Q93063 718 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 PIM2Q9P1W9 311 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 RBMX2Q9Y388 322 aaKnown RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 LMO7Q8WWI1 1683 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 A0A087WXM4 84 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SYCE1LA8MT33 242 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 MAGEB3O15480 346 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 EXTL3O43909 919 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 ZNF862O60290 1169 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 ATP5BP06576 529 aaKnown RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 PSAPP07602 524 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 PPARGP37231 505 aaPredicted RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 GLRBP48167 497 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SIX1Q15475 284 aaPredicted RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 PCDH20Q8N6Y1 951 aaKnown RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 ZBTB8BQ8NAP8 495 aaPredicted RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 SKA1Q96BD8 255 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 RAVER2Q9HCJ3 691 aaKnown RBP10.06□□□□□ -0.8
TRIM23-201ENST00000231524 DMAC2Q9NW81 257 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 NUB1Q9Y5A7 615 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 PCDHA10Q9Y5I2 948 aa10.06□□□□□ -0.8
TRIM23-201ENST00000231524 MAN1A2O60476 641 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 SPRP35270 261 aaPredicted RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 GPX6P59796 221 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 RYBPQ8N488 228 aaPredicted RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 HELQQ8TDG4 1101 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 OCEL1Q9H607 264 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 DDX4Q9NQI0 724 aaKnown RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 DDX28Q9NUL7 540 aaKnown RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 TRNAU1APQ9NX07 287 aaKnown RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 VAV3Q9UKW4 847 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 SLC39A10Q9ULF5 831 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 RPS6KL1Q9Y6S9 549 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 BOLA2-SMG1P6H3BVE0 249 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 DSG3P32926 999 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 INPP5AQ14642 412 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 MAPRE2Q15555 327 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 KYAT3Q6YP21 454 aaKnown RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 NUP93Q8N1F7 819 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 MYO1HQ8N1T3 1032 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 HERPUD2Q9BSE4 406 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 WDR18Q9BV38 432 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 FRMD8P1Q9BZ68 369 aaPredicted RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 WDR41Q9HAD4 459 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 SEPT3Q9UH03 358 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 CRTAMO95727 393 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 BCL10O95999 233 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 CDH3P22223 829 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 GJA8P48165 433 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 INHBEP58166 350 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 NOMO3P69849 1222 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 TSPY1Q01534 308 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 SLC12A1Q13621 1099 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 HABP4Q5JVS0 413 aaKnown RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 CES3Q6UWW8 571 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 UBA3Q8TBC4 463 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 ZNF669Q96BR6 464 aaPredicted RBP10.05□□□□□ -0.8
TRIM23-201ENST00000231524 MARK4Q96L34 752 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 BCL9LQ86UU0 1499 aa10.05□□□□□ -0.8
TRIM23-201ENST00000231524 KDM3BQ7LBC6 1761 aa10.04□□□□□ -0.8
TRIM23-201ENST00000231524 LSM1O15116 133 aaKnown RBP10.04□□□□□ -0.8
TRIM23-201ENST00000231524 PSMD10O75832 226 aa10.04□□□□□ -0.8
TRIM23-201ENST00000231524 MT-CO1P00395 513 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms