RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LIMS2Q7Z4I7 341 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 HACE1Q8IYU2 909 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 RAB3IL1Q8TBN0 382 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 SH3TC2Q8TF17 1288 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 UTP4Q969X6 686 aaKnown RBP22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 C18orf25Q96B23 403 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 SLC7A6OSQ96CW6 309 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 MAML3Q96JK9 1138 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 SIGLEC10Q96LC7 697 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 FAM111AQ96PZ2 611 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 B3GNT5Q9BYG0 378 aa22.76■■□□□ 1.23
SMARCD2-201ENST00000225742 FAM159BA6NKW6 160 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 MLNP12872 115 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 CNTFP26441 200 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 ARFIP2P53365 341 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 CLNKQ7Z7G1 428 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 ANKRD23Q86SG2 305 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 KBTBD7Q8WVZ9 684 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 CSPG4P5Q96PW8 444 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 SRPK1Q96SB4 655 aaKnown RBP22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 KCTD15Q96SI1 283 aaPredicted RBP22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 CXCL16Q9H2A7 254 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 MTMR10Q9NXD2 777 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 KANSL3Q9P2N6 904 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 PCDHA11Q9Y5I1 949 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 RECQL4O94761 1208 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 FAM163BP0C2L3 166 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 NEFHP12036 1026 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 KCNE1P15382 129 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 GTF2A2P52657 109 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 CDK18Q07002 472 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 IRF5Q13568 498 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 XKR4Q5GH76 650 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 WASHC2DQ5SRD0 308 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 FAXCQ5TGI0 409 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 UNC5AQ6ZN44 842 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 C7orf31Q8N865 590 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 RFWD2Q8NHY2 731 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 PTPRN2Q92932 1015 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 TTC17Q96AE7 1141 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 ANKRD27Q96NW4 1050 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 TINF2Q9BSI4 451 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 TRIM6Q9C030 488 aaPredicted RBP22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 DPEP3Q9H4B8 488 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 PLAC1Q9HBJ0 212 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 PLLPQ9Y342 182 aa22.75■■□□□ 1.23
SMARCD2-201ENST00000225742 MBLAC1A4D2B0 266 aaPredicted RBP22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 KPNA7A9QM74 516 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 DGKIO75912 1065 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 METTL18O95568 372 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 GBE1Q04446 702 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 PLEKHG4Q58EX7 1191 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 FAM91A1Q658Y4 838 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 ATG16L1Q676U5 607 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 HEATR6Q6AI08 1181 aaKnown RBP22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 TLDC1Q6P9B6 456 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 KCNT2Q6UVM3 1135 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 TIFABQ6ZNK6 161 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 ZNF534Q76KX8 674 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 MTDHQ86UE4 582 aaKnown RBP22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 STAMBPL1Q96FJ0 436 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 TNIP3Q96KP6 325 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 FAM49AQ9H0Q0 323 aaPredicted RBP22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 C15orf41Q9Y2V0 281 aa22.74■■□□□ 1.23
SMARCD2-201ENST00000225742 ANP32DO95626 131 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 ADORA2BP29275 332 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 ARL4AP40617 200 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 MATKP42679 507 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 SLC10A2Q12908 348 aaPredicted RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 DBN1Q16643 649 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 CTC1Q2NKJ3 1217 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 SV2CQ496J9 727 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 SYCP2LQ5T4T6 812 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 C9orf131Q5VYM1 1079 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 GPR142Q7Z601 462 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 CFAP61Q8NHU2 1237 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 TFB1MQ8WVM0 346 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 OLFM3Q96PB7 478 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 FERMT1Q9BQL6 677 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 TBC1D10AQ9BXI6 508 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 C12orf65Q9H3J6 166 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 EIF2B3Q9NR50 452 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 SF3B1O75533 1304 aaKnown RBP eCLIP22.73■■□□□ 1.239e-6■■■■■ 68.9
SMARCD2-201ENST00000225742 A8MUI8 341 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 CXorf49A8MYA2 514 aaPredicted RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 BTBD19C9JJ37 291 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 XPO1O14980 1071 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 RFPL1O75677 317 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 STK10O94804 968 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 HAUS5O94927 633 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 SMIM10L2AP0DMW4 78 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 SMIM10L2BP0DMW5 78 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 LCP1P13796 627 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 CCDC130P13994 396 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 TFE3P19532 575 aaPredicted RBP22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 BGNP21810 368 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 TAF6P49848 677 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 CCNG1P51959 295 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 KRT72Q14CN4 511 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 STEAP4Q687X5 459 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms