RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 RIPK2O43353 540 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 TRAF2Q12933 501 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 SLC22A9Q8IVM8 553 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 SNRNP27Q8WVK2 155 aaKnown RBP18.34■□□□□ 0.53
EXTL3-201ENST00000220562 OSMRQ99650 979 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 ERI2A8K979 691 aaKnown RBP18.34■□□□□ 0.53
EXTL3-201ENST00000220562 BAIAP3O94812 1187 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 SEC23AQ15436 765 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 LPCAT1Q8NF37 534 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 MAGED4Q96JG8 741 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 RAD54BQ9Y620 910 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 ITGB6P18564 788 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 EPHB3P54753 998 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 POU6F1Q14863 301 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 TRIM16LQ309B1 348 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 EDEM1Q92611 657 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 STN1Q9H668 368 aaKnown RBP18.34■□□□□ 0.53
EXTL3-201ENST00000220562 NAALADL1Q9UQQ1 740 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 DDTLA6NHG4 134 aaPredicted RBP18.34■□□□□ 0.53
EXTL3-201ENST00000220562 CCNT2O60583 730 aaKnown RBP18.34■□□□□ 0.53
EXTL3-201ENST00000220562 TPH1P17752 444 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 PKN1Q16512 942 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 CDKAL1Q5VV42 579 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 NT5DC3Q86UY8 548 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 CAVIN3Q969G5 261 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 ITGA9Q13797 1035 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 SAMD3Q8N6K7 520 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 UCMAQ8WVF2 138 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 CAMKK2Q96RR4 588 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 NAT9Q9BTE0 207 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 TIMM13Q9Y5L4 95 aaPredicted RBP18.33■□□□□ 0.53
EXTL3-201ENST00000220562 URODP06132 367 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 CKBP12277 381 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 SCNN1BP51168 640 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 AGKQ53H12 422 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 ANKS6Q68DC2 871 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 KIAA0895Q8NCT3 520 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 NCKIPSDQ9NZQ3 722 aa18.33■□□□□ 0.53
EXTL3-201ENST00000220562 MEI4A8MW99 385 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 GRTP1Q5TC63 336 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 PHACTR4Q8IZ21 702 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 DDHD1Q8NEL9 900 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 MED8Q96G25 268 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 TLR8Q9NR97 1041 aaKnown RBP18.33■□□□□ 0.52
EXTL3-201ENST00000220562 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 RNASEH1O60930 286 aaKnown RBP18.33■□□□□ 0.52
EXTL3-201ENST00000220562 GSTM1P09488 218 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 SLC2A4P14672 509 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 MGAT5Q09328 741 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 FBXO47Q5MNV8 452 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 N4BP2L1Q5TBK1 243 aaPredicted RBP18.33■□□□□ 0.52
EXTL3-201ENST00000220562 SYTL5Q8TDW5 730 aaPredicted RBP18.33■□□□□ 0.52
EXTL3-201ENST00000220562 EHD4Q9H223 541 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 ANKZF1Q9H8Y5 726 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 ADGRA3Q8IWK6 1321 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 LINC00854A0A1B0GVQ3 168 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 KANSL1LA0AUZ9 987 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 HOXA2O43364 376 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 PTENP60484 403 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 OASLQ15646 514 aaKnown RBP18.33■□□□□ 0.52
EXTL3-201ENST00000220562 MAN1C1Q9NR34 630 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 PIH1D1Q9NWS0 290 aaKnown RBP18.33■□□□□ 0.52
EXTL3-201ENST00000220562 TSPAN16Q9UKR8 245 aa18.33■□□□□ 0.52
EXTL3-201ENST00000220562 UBDO15205 165 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 TPBGLP0DKB5 382 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 GRK2P25098 689 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 CCT8P50990 548 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 NDST1P52848 882 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 SV2AQ7L0J3 742 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 PHF21BQ96EK2 531 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 RXFP1Q9HBX9 757 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 PAIP2BQ9ULR5 123 aaKnown RBP18.32■□□□□ 0.52
EXTL3-201ENST00000220562 SNX8Q9Y5X2 465 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 KATNA1O75449 491 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 PARNO95453 639 aaKnown RBP18.32■□□□□ 0.52
EXTL3-201ENST00000220562 GRK3P35626 688 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 PCDH9Q9HC56 1237 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 RHBDL2Q9NX52 303 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 PTPN4P29074 926 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 WEE1P30291 646 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 STARD3Q14849 445 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
EXTL3-201ENST00000220562 UBOX5O94941 541 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 POMCP01189 267 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 AKAP5P24588 427 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 SARSP49591 514 aaKnown RBP18.32■□□□□ 0.52
EXTL3-201ENST00000220562 C1QBPQ07021 282 aaKnown RBP18.32■□□□□ 0.52
EXTL3-201ENST00000220562 ADIGQ0VDE8 80 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 IZUMO2Q6UXV1 221 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 ELOVL6Q9H5J4 265 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 ZNF280DQ6N043 979 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 FAM9CQ8IZT9 166 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 RBM22Q9NW64 420 aaKnown RBP eCLIP18.32■□□□□ 0.52
EXTL3-201ENST00000220562 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
EXTL3-201ENST00000220562 H3BQF6 201 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 MT-CO1P00395 513 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 NFIL3Q16649 462 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 ERO1BQ86YB8 467 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 YME1L1Q96TA2 773 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms