RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SNX25Q9H3E2 840 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 NCKIPSDQ9NZQ3 722 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 TTC4O95801 387 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 CPA2P48052 419 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 CTAG1AP78358 180 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 PRKCEQ02156 737 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 EIF2B5Q13144 721 aaKnown RBP14.09□□□□□ -0.15
GABPB1-201ENST00000220429 NANOGP8Q6NSW7 305 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 TTC23LQ6PF05 361 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 ABHD15Q6UXT9 468 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 PYDC1Q8WXC3 89 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 MED30Q96HR3 178 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 EGLN2Q96KS0 407 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 TTC25Q96NG3 672 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 THTPAQ9BU02 230 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 Q9H521 79 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 C17orf75Q9HAS0 396 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 FBXO6Q9NRD1 293 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-201ENST00000220429 TOPORSQ9NS56 1045 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-201ENST00000220429 GPRC5DQ9NZD1 345 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 SEPT9Q9UHD8 586 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-201ENST00000220429 APPL1Q9UKG1 709 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 GOLGA8CPA6NN73 597 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 SPATA31C2B4DYI2 1134 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 H3BRJ5 948 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 MYBPC1Q00872 1141 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 SNAPC2Q13487 334 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 PRKG1Q13976 671 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 SUZ12Q15022 739 aaKnown RBP14.09□□□□□ -0.15
GABPB1-201ENST00000220429 TRIP10Q15642 601 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 USP41Q3LFD5 358 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 EGFLAMQ63HQ2 1017 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 IYDQ6PHW0 289 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 GALNT4Q8N4A0 578 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 CDHR1Q96JP9 859 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 FBXL18Q96ME1 805 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 TRIM55Q9BYV6 548 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 PCYOX1Q9UHG3 505 aa14.09□□□□□ -0.15
GABPB1-201ENST00000220429 DDX3YO15523 660 aaKnown RBP14.08□□□□□ -0.15
GABPB1-201ENST00000220429 DGAT1O75907 488 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 SGPL1O95470 568 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 ESRRBO95718 433 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 SP2Q02086 613 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 PSMD6Q15008 389 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 CLUL1Q15846 466 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 GPR162Q16538 588 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 MAPK6Q16659 721 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 NOL9Q5SY16 702 aaKnown RBP14.08□□□□□ -0.15
GABPB1-201ENST00000220429 KRT39Q6A163 491 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 ITPRIPL1Q6GPH6 555 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 TAS1R3Q7RTX0 852 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 FAM71AQ8IYT1 594 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 PPM1KQ8N3J5 372 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 PCYOX1LQ8NBM8 494 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 PDZD8Q8NEN9 1154 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 RAB3IL1Q8TBN0 382 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 CALML6Q8TD86 181 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 EPS8L1Q8TE68 723 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 ZNF75CPQ92670 426 aaPredicted RBP14.08□□□□□ -0.15
GABPB1-201ENST00000220429 PCDHB18PQ96TA0 734 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 KLC2Q9H0B6 622 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 ACP6Q9NPH0 428 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 CRNNQ9UBG3 495 aaPredicted RBP14.08□□□□□ -0.15
GABPB1-201ENST00000220429 PCDHGB4Q9UN71 923 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 COQ4Q9Y3A0 265 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 PCDHGB5Q9Y5G0 923 aa14.08□□□□□ -0.15
GABPB1-201ENST00000220429 GUCY1B2O75343 617 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 FTLP02792 175 aaPredicted RBP14.08□□□□□ -0.16
GABPB1-201ENST00000220429 CHRNB2P17787 502 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 ENPP1P22413 925 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 AP3M2P53677 418 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 FSTL1Q12841 308 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 CALCOCO2Q13137 446 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 CCDC81Q6ZN84 652 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 USP43Q70EL4 1123 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 NOP9Q86U38 636 aaKnown RBP14.08□□□□□ -0.16
GABPB1-201ENST00000220429 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.08□□□□□ -0.163e-6■■□□□ 12.2
GABPB1-201ENST00000220429 MCPH1Q8NEM0 835 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 MFSD14AQ96MC6 490 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 C2orf49Q9BVC5 232 aaPredicted RBP14.08□□□□□ -0.16
GABPB1-201ENST00000220429 ARHGEF4Q9NR80 690 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 IGSF9Q9P2J2 1179 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 RABGEF1Q9UJ41 708 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 MOSPD1Q9UJG1 213 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 NOCTQ9UK39 431 aaKnown RBP14.08□□□□□ -0.16
GABPB1-201ENST00000220429 PLA2G4CQ9UP65 541 aa14.08□□□□□ -0.16
GABPB1-201ENST00000220429 DICER1Q9UPY3 1922 aaKnown RBP14.08□□□□□ -0.16
GABPB1-201ENST00000220429 MYOCOSA0A1B0GUC4 107 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 PEX1O43933 1283 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 PEX10O60683 326 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 KRT4P19013 534 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 ZNF211Q13398 564 aaPredicted RBP14.07□□□□□ -0.16
GABPB1-201ENST00000220429 CRY1Q16526 586 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 GRAMD1BQ3KR37 738 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 RBM15BQ8NDT2 890 aaKnown RBP14.07□□□□□ -0.16
GABPB1-201ENST00000220429 NLGN2Q8NFZ4 835 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms