RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ILDR2Q71H61 639 aa23.83■■□□□ 1.4
TARBP1-201ENST00000040877 HORMAD1Q86X24 394 aa23.83■■□□□ 1.4
TARBP1-201ENST00000040877 MYO1GB0I1T2 1018 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 NPY2RP49146 381 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 TRIP10Q15642 601 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 FAM171A1Q5VUB5 890 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 SNCAIPQ9Y6H5 919 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 NCKAP1LP55160 1127 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 CAMK2GQ13555 558 aaPredicted RBP23.82■■□□□ 1.4
TARBP1-201ENST00000040877 BTG3Q14201 252 aaPredicted RBP23.82■■□□□ 1.4
TARBP1-201ENST00000040877 TRAPPC12Q8WVT3 735 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 SLC4A9Q96Q91 983 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 LOC100653049A0A140TA62 436 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 KRT34O76011 436 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 SOAT1P35610 550 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 DEFB128Q7Z7B8 93 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
TARBP1-201ENST00000040877 EFCAB1Q9HAE3 211 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 LNPEPQ9UIQ6 1025 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 TNFSF13BQ9Y275 285 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 LRRC10BA6NIK2 292 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 LRRC34Q8IZ02 419 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 FUT8Q9BYC5 575 aa23.82■■□□□ 1.4
TARBP1-201ENST00000040877 MTMR8Q96EF0 704 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 GPAMQ9HCL2 828 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 MPOP05164 745 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 CKBP12277 381 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 GTF2BQ00403 316 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 WLSQ5T9L3 541 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 UROC1Q96N76 676 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 L1RE1Q9UN81 338 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 KANSL1LA0AUZ9 987 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 O00370 1275 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 DNALI1O14645 258 aaPredicted RBP23.81■■□□□ 1.4
TARBP1-201ENST00000040877 HSPA13P48723 471 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 CNTN1Q12860 1018 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 CYTH1Q15438 398 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 PREPLQ4J6C6 727 aaPredicted RBP23.81■■□□□ 1.4
TARBP1-201ENST00000040877 SEL1L3Q68CR1 1132 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 HTR3CQ8WXA8 447 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 TUBGCP4Q9UGJ1 667 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 TM4SF1P30408 202 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 MEA1Q16626 185 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 MDM1Q8TC05 714 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 ABHD8Q96I13 439 aa23.81■■□□□ 1.4
TARBP1-201ENST00000040877 ENO4A6NNW6 628 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 CAND2O75155 1236 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 HOXB8P17481 243 aaPredicted RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 CYP2C18P33260 490 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 CCDC60Q8IWA6 550 aaPredicted RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 THG1LQ9NWX6 298 aaKnown RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 PLA2G6O60733 806 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 TPBGLP0DKB5 382 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 CSE1LP55060 971 aaKnown RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 PLPPR4Q7Z2D5 763 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 SLC2A14Q8TDB8 520 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 POPDC2Q9HBU9 364 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 DYRK1BQ9Y463 629 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 TIMM13Q9Y5L4 95 aaPredicted RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 DDX3XO00571 662 aaKnown RBP eCLIP23.8■■□□□ 1.49e-7■■■□□ 16.8
TARBP1-201ENST00000040877 SYNCRIPO60506 623 aaKnown RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 PRKAA2P54646 552 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 NDEL1Q9GZM8 345 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 A0A087X0B3 334 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 MYL4P12829 197 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 HLA-DPA1P20036 260 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 GRK3P35626 688 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 TBX2Q13207 712 aaPredicted RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 OTULINQ96BN8 352 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 HES6Q96HZ4 224 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 TMEM39AQ9NV64 488 aa23.8■■□□□ 1.4
TARBP1-201ENST00000040877 H2AFY2Q9P0M6 372 aaPredicted RBP23.8■■□□□ 1.4
TARBP1-201ENST00000040877 PQBP1O60828 265 aaKnown RBP23.79■■□□□ 1.4
TARBP1-201ENST00000040877 CPA3P15088 417 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 ACAT1P24752 427 aaKnown RBP23.79■■□□□ 1.4
TARBP1-201ENST00000040877 PRKCIP41743 596 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 SCNN1BP51168 640 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 FKBP1BP68106 108 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 EDEM1Q92611 657 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 CIPCQ9C0C6 399 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 XYLBO75191 536 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 NCALDP61601 193 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 GFM2Q969S9 779 aaKnown RBP23.79■■□□□ 1.4
TARBP1-201ENST00000040877 DTNAQ9Y4J8 743 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 CD151P48509 253 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 PRIM2P49643 509 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 PRKCQQ04759 706 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 SLC30A9Q6PML9 568 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 MEIS2O14770 477 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 H2AFXP16104 143 aaPredicted RBP23.79■■□□□ 1.4
TARBP1-201ENST00000040877 NAB1Q13506 487 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 SLC9A9Q8IVB4 645 aa23.79■■□□□ 1.4
TARBP1-201ENST00000040877 RECQL4O94761 1208 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 SEC24DO94855 1032 aaPredicted RBP23.78■■□□□ 1.4
TARBP1-201ENST00000040877 NUDT2P50583 147 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 DEFB106AQ8N104 65 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 TMCO5AQ8N6Q1 288 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 APOL2Q9BQE5 337 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms