RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 MAGEA6P43360 314 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 ZNF135P52742 658 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 PPP2R2AP63151 447 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 PITX1P78337 314 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 AUHQ13825 339 aaKnown RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 STAT4Q14765 748 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 ZC3H18Q86VM9 953 aaKnown RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 HASPINQ8TF76 798 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 SEPT8Q92599 483 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 WDR6Q9NNW5 1121 aaKnown RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 PIGVQ9NUD9 493 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 SLC12A6Q9UHW9 1150 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 OGDHLQ9ULD0 1010 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 CEP350Q5VT06 3117 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 HACD1B0YJ81 288 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 CAPN9O14815 690 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 SYN3O14994 580 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 IVLP07476 585 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 USP17L7P0C7H9 530 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 TSHRP16473 764 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 IBSPP21815 317 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 ADRA1BP35368 520 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 MDH1P40925 334 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 HCAR3P49019 387 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 ARL4CP56559 192 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 MAGOHP61326 146 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 HIF1AQ16665 826 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 SLC45A4Q5BKX6 768 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 DNAJC21Q5F1R6 531 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 EFHC2Q5JST6 749 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 BZW1Q7L1Q6 419 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 EPS8L3Q8TE67 593 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 SH3TC2Q8TF17 1288 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 FRMD8Q9BZ67 464 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 ZCWPW1Q9H0M4 648 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 CNOT10Q9H9A5 744 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 SAYSD1Q9NPB0 183 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 BCCIPQ9P287 314 aaKnown RBP eCLIP14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 FBXW11Q9UKB1 542 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 HEY1Q9Y5J3 304 aa14.85□□□□□ -0.03
RTFDC1-201ENST00000023939 F8W810 466 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 CHADO15335 359 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 ZNF189O75820 626 aaPredicted RBP14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 GNGT1P63211 74 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 SEMA3BQ13214 749 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 ANKRD22Q5VYY1 191 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 NCBP2-AS2Q69YL0 99 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 LEKR1Q6ZMV7 388 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 DCP1BQ8IZD4 617 aaKnown RBP14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 CRIPAKQ8N1N5 446 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 DBF4BQ8NFT6 615 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 SLC7A14Q8TBB6 771 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 RNF139Q8WU17 664 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 FUBP3Q96I24 572 aaKnown RBP eCLIP14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 C9orf72Q96LT7 481 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 OLFM3Q96PB7 478 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 QKIQ96PU8 341 aaKnown RBP eCLIP14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 FAM193BQ96PV7 902 aaPredicted RBP14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 TMEM209Q96SK2 561 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 CCDC77Q9BR77 488 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 RHOBTB2Q9BYZ6 727 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 PPCSQ9HAB8 311 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 ARHGEF4Q9NR80 690 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 DNAJC17Q9NVM6 304 aaKnown RBP14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 TMEM51Q9NW97 253 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 LGALS13Q9UHV8 139 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 ZMYND8Q9ULU4 1186 aaPredicted RBP14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 PATJQ8NI35 1801 aa14.84□□□□□ -0.03
RTFDC1-201ENST00000023939 A0A087WUV0 522 aaPredicted RBP14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 TLDC2A0PJX2 215 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 DCDC2CA8MYV0 355 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 KCNN4O15554 427 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 HOXA2O43364 376 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 GCATO75600 419 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 DGKIO75912 1065 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 PARNO95453 639 aaKnown RBP14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 NCAM1P13591 858 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 GOT1P17174 413 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 RBL1P28749 1068 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 ATP5DP30049 168 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 CXCR3P49682 368 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 ATP1A2P50993 1020 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 GBE1Q04446 702 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 RNASELQ05823 741 aaKnown RBP14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 SLC10A2Q12908 348 aaPredicted RBP14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 DPYSQ14117 519 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 KCNJ11Q14654 390 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 PPP1R21Q6ZMI0 780 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 SPATA2LQ8IUW3 424 aaPredicted RBP14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 PYROXD2Q8N2H3 581 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 RIBC1Q8N443 379 aaPredicted RBP14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 UHMK1Q8TAS1 419 aaKnown RBP14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 DTLQ9NZJ0 730 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 PCDHB7Q9Y5E2 793 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 PTPRDP23468 1912 aa14.83□□□□□ -0.03
RTFDC1-201ENST00000023939 NLRC5Q86WI3 1866 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 C5orf60A6NFR6 353 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 TNFRSF10BO14763 440 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 TMEM63AO94886 807 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms