RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 GckP52792 465 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Dab2P98078 766 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 VcpQ01853 806 aaKnown RBP13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Ugt3a1Q3UP75 523 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Nlrp4eQ66X19 978 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Trim68Q8K243 485 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Zcchc14Q8VIG0 956 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Tspan3Q9QY33 253 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Krt27Q9Z320 448 aa13.91□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Gm42688A0A0R3P9D1 673 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Card9A2AIV8 536 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Mroh4G3X8W1 983 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Gm3739L7N296 216 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Pias1O88907 651 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Tbc1d10aP58802 500 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Tmem209Q8BRG8 561 aaKnown RBP13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 ClmnQ8C5W0 1052 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Ccdc142Q8CAI1 738 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Arhgap18Q8K0Q5 663 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Vps37bQ8R0J7 285 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Lars2Q8VDC0 902 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 AclyQ91V92 1091 aaKnown RBP13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Tekt2Q922G7 430 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Fuca2Q99KR8 461 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Satl1Q9D5N8 744 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Timp4Q9JHB3 224 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Vwa5b1A9Z1V5 1215 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Srsf11E9Q6E5 511 aaKnown RBP13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Gm10719E9Q7T3 227 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Capn6O35646 641 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 CcnoP0C242 352 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Brcc3P46737 291 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Sem1P60897 70 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Pde1bQ01065 535 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Aarsd1Q3THG9 412 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 CpQ61147 1061 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 EfsQ64355 560 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Dusp11Q6NXK5 321 aaKnown RBP13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Kif11Q6P9P6 1052 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Anapc5Q8BTZ4 740 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Olfr1352Q8VGX5 309 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Mob2Q8VI63 235 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 MgarpQ8VI64 283 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Tpgs1Q99MS8 303 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Anxa9Q9JHQ0 345 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Clcn2Q9R0A1 908 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Diaph3Q9Z207 1171 aa13.9□□□□□ -0.18
Rnf4-204ENSMUST00000182047 Trim30bE9PVL6 203 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Rpl21O09167 160 aaKnown RBP13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Glb1P23780 647 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 PorP37040 678 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 SftpbP50405 377 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 SbdsP70122 250 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gm29609Q3UU56 907 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ccdc110Q3V125 848 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gstt2Q61133 244 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Olfr212Q7TS33 327 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gtf3c2Q8BL74 907 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Metap1Q8BP48 386 aaKnown RBP13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Dclre1bQ8C7W7 541 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Zswim3Q8CFL8 695 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Hars2Q99KK9 505 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Mxra7Q9CZH7 178 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Alg13Q9D8C3 1166 aaKnown RBP13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Zc3h12bG3X9I7 835 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 AlbP07724 608 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 SobpQ0P5V2 864 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Grm6Q5NCH9 871 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 PterQ60866 349 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Sh3gl3Q62421 347 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Arhgef18Q6P9R4 1021 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 AmphQ7TQF7 686 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 CyldQ80TQ2 952 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Slc39a13Q8BZH0 361 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 AA792892Q8C6S1 278 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Fam126bQ8C729 530 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Timd2Q8R183 305 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ugp2Q91ZJ5 508 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Pard3bQ9CSB4 1203 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 MtrexQ9CZU3 1040 aaKnown RBP13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Tmem174Q9DCX7 243 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gfra4Q9JJT2 260 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 XkQ9QXY7 446 aa13.89□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gm8369E9PZI3 166 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Glud1P26443 558 aaKnown RBP13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Rnf19aP50636 840 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Myl2P51667 166 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 B3gat3P58158 335 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Zbtb14Q08376 449 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Sppl2bQ3TD49 578 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ifnl2Q4VK74 193 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Rab34Q64008 259 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Mpp4Q6P7F1 635 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Rad9bQ6WBX7 403 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ankrd45Q810N6 248 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Dupd1Q8BK84 215 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Amer2Q8CCJ4 672 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Clstn3Q99JH7 956 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 NamptQ99KQ4 491 aa13.88□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Them5Q9CQJ0 248 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms