RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Slc43a1Q8BSM7 564 aa19.01■□□□□ 0.63
Sort1-203ENSMUST00000135636 Hist1h2aaQ8CGP4 129 aa19.01■□□□□ 0.63
Sort1-203ENSMUST00000135636 Rpa1Q8VEE4 623 aaKnown RBP19.01■□□□□ 0.63
Sort1-203ENSMUST00000135636 GatbQ99JT1 557 aa19.01■□□□□ 0.63
Sort1-203ENSMUST00000135636 Hspa12bQ9CZJ2 685 aa19.01■□□□□ 0.63
Sort1-203ENSMUST00000135636 Lrrc71Q9D3W5 558 aa19.01■□□□□ 0.63
Sort1-203ENSMUST00000135636 PpihQ9D868 188 aa19.01■□□□□ 0.63
Sort1-203ENSMUST00000135636 FancfE9Q5Z5 343 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Psmb9P28076 219 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Pabpc1P29341 636 aaKnown RBP19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ptgs2Q05769 604 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Pgrmc2Q80UU9 217 aaKnown RBP19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Vmn2r43Q80Z08 845 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ddx43D3Z6P9 646 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Sema3cQ62181 751 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Rbm22Q8BHS3 420 aaKnown RBP19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Clec4gQ8BNX1 294 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Slc44a2Q8BY89 706 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Gm382B1AXN3 1250 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Luc7l3Q5SUF2 432 aaKnown RBP19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Smpd4Q6ZPR5 823 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Gramd1cQ8CI52 457 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Tnfaip8l2Q9D8Y7 184 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Mdc1Q5PSV9 1707 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Il1aP01582 270 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Phkg1P07934 388 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Cav1P49817 178 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Nat9Q3UG98 241 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 PostnQ62009 838 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Zbtb5Q7TQG0 670 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 CcinQ8CDE2 588 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Slc39a3Q99K24 317 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 PigoQ9JJI6 1093 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Psma3O70435 255 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Prl2c3P04768 224 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 RapsnP12672 412 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Npas2P97460 816 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Mfhas1Q3V1N1 1048 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Znf280cQ6P3Y5 742 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Commd2Q8BXC6 199 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Snx29Q9D3S3 818 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Auts2A0A087WPF7 1261 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Nr1i3O35627 358 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Aldh1a7O35945 501 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Xirp1O70373 1129 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Clec12aQ504P2 267 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Stambpl1Q76N33 436 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Stk40Q7TNL3 435 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 GanQ8CA72 597 aa19■□□□□ 0.63
Sort1-203ENSMUST00000135636 Osbpl9A2A8Z1 736 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Herc3A6H6S0 1050 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Cxcl12P40224 93 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Adamts2Q8C9W3 1213 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Slc9a8Q8R4D1 576 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 GabreA2AMW3 916 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Sephs2P97364 452 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Tssk1bQ61241 365 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ppp2r2aQ6P1F6 447 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Cxcl16Q8BSU2 246 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ap2b1Q9DBG3 937 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Atp8b4A2ANX3 1194 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Angpt2O35608 496 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Taf13P61216 124 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Slx1bQ8BX32 270 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Apol9aQ8VDU3 310 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ndel1Q9ERR1 345 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Zcchc11B2RX14 1644 aaKnown RBP18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Fam205aA2APU8 1308 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ttll8A4Q9F1 832 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Gm15448F6PZL4 682 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Eri2Q5BKS4 688 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Tfe3Q64092 572 aaKnown RBP18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Crls1Q80ZM8 303 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 PdxkQ8K183 312 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 SncaipQ99ME3 962 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Slco1a1Q9QXZ6 670 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Adam18Q9R157 719 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 TriqkB2B9E1 86 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Klc1O88447 541 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Mcph1Q7TT79 822 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Q8BGD0 127 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Rfc5Q9D0F6 339 aa18.99■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ms4a14A0A087WSD2 1232 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Pacsin1Q61644 441 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Inpp5bQ8K337 993 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Tmem120bQ3TA38 339 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Ctu1Q99J10 420 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 1700109H08RikQ9D9C0 210 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 CemipQ8BI06 1361 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Gm5160F8VPN3 147 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Smyd1P97443 490 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Olfr20Q7TRX9 314 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 4921511C20RikQ8BVT7 469 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 KlbQ99N32 1043 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Marc1Q9CW42 340 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 AvilO88398 819 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Exoc3l1Q8BI71 739 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Slc9b1Q8C0X2 565 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Idh3bQ91VA7 384 aa18.98■□□□□ 0.63
Sort1-203ENSMUST00000135636 Tex46Q9CPU3 165 aa18.98■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms