RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Zfyve9A2A8R0 1397 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rpl36P47964 105 aaKnown RBP12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pdap1Q3UHX2 181 aaKnown RBP12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Plk4Q64702 925 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fndc11Q80WB0 326 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Kctd2Q8CEZ0 266 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rsl24d1Q99L28 163 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Sesn3Q9CYP7 492 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Grik3B1AS29 919 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Cdh19E9Q3A7 770 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Arhgef16Q3U5C8 713 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Otud6aQ6IE21 290 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fam149b1Q6NSV7 578 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tmem82Q8R115 356 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fam192aQ91WE2 254 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gpn3Q9D3W4 284 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Slc6a16A0A1L1SR47 742 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 PrkcdP28867 674 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fam20cQ5MJS3 579 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pdlim2Q8R1G6 349 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 PpidQ9CR16 370 aaKnown RBP12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 PyglQ9ET01 850 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mid2Q9QUS6 705 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ptpn4Q9WU22 926 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Myh9Q8VDD5 1960 aaKnown RBP12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm28168A0A087WNP1 180 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Meis3P97368 378 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pla2g4dQ50L43 825 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pcyox1lQ8C7K6 495 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Prmt7Q922X9 692 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Phf2Q9WTU0 1096 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tle6Q9WVB3 581 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Zbed6D2EAC2 980 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 C2cd2E9Q3C1 696 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Lrrc8bQ5DU41 803 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Myo19Q5SV80 963 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nr1h2Q60644 446 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gemin8Q8BHE1 238 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fbxl13Q8CDU4 790 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 GhdcQ99J23 532 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pramef6A2A8M8 474 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Phkg1P07934 388 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rc3h1Q4VGL6 1130 aaKnown RBP12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Dnajc1Q61712 552 aaKnown RBP12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Q9CYI0 393 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nusap1Q9ERH4 427 aaKnown RBP12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 SynrgQ5SV85 1306 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tnrc6bQ8BKI2 1810 aaKnown RBP12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Slfn3A0A1L1STQ7 640 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Zfand4D3Z3C6 739 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Cpa3P15089 417 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ankrd27Q3UMR0 1048 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 MregQ6NVG5 214 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Cox10Q8CFY5 443 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Wrap53Q8VC51 532 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Crtc3Q91X84 619 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Far1Q922J9 515 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Q922M7 232 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 GpamQ61586 827 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gpr101Q80T62 511 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Vcpip1Q8CDG3 1220 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Actr8Q8R2S9 624 aaKnown RBP12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Chmp1b2Q9CQD4 199 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 QkiQ9QYS9 341 aaKnown RBP12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nfu1Q9QZ23 255 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nphs1Q9QZS7 1256 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ccdc120A2AEV7 629 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mettl21eQ8CDZ2 244 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 2310003L06RikQ9CV82 495 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gpc1Q9QZF2 557 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 FgrP14234 517 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mmp13P33435 472 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rhbdl3P58873 404 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Q8BGN9 141 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 E2f4Q8R0K9 410 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Wdr98Q8VC42 657 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fbxo32Q9CPU7 355 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tktl2Q9D4D4 627 aa12.24□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nipsnap3aB1AWZ3 247 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm7275E9Q1B3 247 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pola2P33611 600 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Akr1c6P70694 323 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Cct3P80318 545 aaKnown RBP12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tas2r134Q7TQB0 298 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Olfr301Q7TS04 311 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ubxn10Q8BG34 277 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gcfc2Q8BKT3 769 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Smim5Q8BT42 78 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rprd1aQ8VDS4 312 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Olfr743L7N1Y2 311 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tcf3P15806 651 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Slc24a2Q14BI1 711 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Commd2Q8BXC6 199 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fam126bQ8C729 530 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tsen15Q8R3W5 168 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Atg7Q9D906 698 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Sae1Q9R1T2 350 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm5478D3Z6R0 159 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Reps1O54916 795 aa12.23□□□□□ -0.45
Trim56-201ENSMUST00000054384 Kcnj6P48542 425 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms