RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Gpd1lQ3ULJ0 351 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Polr2eQ80UW8 210 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ppp4r4Q8C0Y0 875 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Dpp3Q99KK7 738 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sh2d4aQ9D7V1 421 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sgf29Q9DA08 293 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Serpinb9bQ9DAV6 377 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr711Q9EPG2 314 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pik3cgQ9JHG7 1102 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tnrc6cQ3UHC0 1690 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fam171a1A2ATK9 892 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pou4f1P17208 421 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rpl5P47962 297 aaKnown RBP10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tab3Q571K4 716 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ddx5Q61656 614 aaKnown RBP10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zswim6Q80TB7 1207 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Trnp1Q80ZI1 223 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Elmo3Q8BYZ7 720 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr866Q8VFI7 312 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Lrrc17Q9CXD9 443 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 EtfbQ9DCW4 255 aaKnown RBP10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gprc5dQ9JIL6 344 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Slc2a5Q9WV38 501 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cdr2lA2A6T1 465 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mmp13P33435 472 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Elk3P41971 409 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 CstaP56567 97 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rmdn3Q3UJU9 470 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ksr1Q61097 873 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fscn1Q61553 493 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gm7247Q6UY52 187 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tubgcp5Q8BKN5 1024 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mamdc2Q8CG85 686 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Nol6Q8R5K4 1152 aaKnown RBP10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gramd1aQ8VEF1 722 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Polr3hQ9D2C6 204 aaKnown RBP10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Htra2Q9JIY5 458 aa10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Marf1Q8BJ34 1730 aaKnown RBP10.21□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Col5a2Q3U962 1497 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cylc2B1AWN8 422 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Siah3B2RWG3 268 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Magea4F2Z493 315 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm8922F6XVS9 199 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm17019K7N6W5 255 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Trdmt1O55055 415 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ccdc185Q3V118 621 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ddr2Q62371 854 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Znf280dQ68FE8 974 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Bri3bpQ8BXV2 253 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Washc5Q8C2E7 1159 aaKnown RBP10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 TwnkQ8CIW5 685 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cnot3Q8K0V4 751 aaKnown RBP10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Exd2Q8VEG4 650 aaKnown RBP10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PdgfdQ925I7 370 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ndufaf7Q9CWG8 436 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fam111aQ9D2L9 613 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sun1Q9D666 913 aaKnown RBP10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 OmdO35103 423 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Adcy1O88444 1118 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PrkcdP28867 674 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Irf3P70671 419 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Smcr8Q3UMB5 935 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 FaxcQ3UMF9 409 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mks1Q5SW45 561 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Syn2Q64332 586 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Krt73Q6NXH9 539 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zfp398Q8BV16 643 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 4921511C20RikQ8BVT7 469 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tada2aQ8CHV6 443 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nsl1Q8K305 281 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tmem82Q8R115 356 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mgat5Q8R4G6 740 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Smap1Q91VZ6 440 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pcyox1Q9CQF9 505 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dis3Q9CSH3 958 aaKnown RBP10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Borcs5Q9D920 195 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Jph2Q9ET78 696 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kat2bQ9JHD1 813 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nphs1Q9QZS7 1256 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cntnap2Q9CPW0 1332 aa10.21□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zfp788E9Q980 884 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dsg3O35902 993 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Smad1P70340 465 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tmprss15P97435 1069 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pla2g4dQ50L43 825 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Usp1Q8BJQ2 784 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ints6lQ8BND4 861 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Amz1Q8BVF9 502 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sik2Q8CFH6 931 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Colgalt1Q8K297 617 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ddx18Q8K363 660 aaKnown RBP10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Serpina3nQ91WP6 418 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Anxa13Q99JG3 317 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dmap1Q9JI44 468 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Copg2Q9QXK3 871 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slfn2Q9Z0I6 378 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Bmp15Q9Z0L4 392 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 RptorQ8K4Q0 1335 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Plekhg4A0A1L1SU27 1217 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dhtkd1A2ATU0 921 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms