RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 TcimQ9D915 106 aa11.13□□□□□ -0.63
Ciita-201ENSMUST00000023147 CercamA3KGW5 592 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 R3hdm1E9Q9Q2 1135 aaKnown RBP11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Pcdh9F8VPK8 1237 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 CartptP56388 129 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Mageb5Q14AN0 366 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Atp13a4Q5XF90 1193 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 SntnQ8C9X1 147 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Caap1Q8VDY9 356 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Rmnd5bQ91YQ7 393 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Trmt11Q9CWH5 460 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 PygmQ9WUB3 842 aaKnown RBP11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Ap4b1Q9WV76 738 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Sept5Q9Z2Q6 369 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Ppp1r36D3Z0R2 411 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Ifi213D3Z5G0 586 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Vmn2r31L7N1Z4 861 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 PtpaP58389 323 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Gstt2Q61133 244 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Exoc3l4Q6DIA2 721 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Pgs1Q8BHF7 553 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Hspa13Q8BM72 471 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Klhl24Q8BRG6 600 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Dnali1Q8BVN8 258 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 ThtpaQ8JZL3 224 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Pcdha9Q91Y11 979 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 MsraQ9D6Y7 233 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Nek6Q9ES70 313 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Topaz1E5FYH1 1653 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 RptorQ8K4Q0 1335 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Znf711A2ANX9 761 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Tsc22d2E9Q7M2 769 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Sgo2bJ3QMK1 1167 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Angpt2O35608 496 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 DaglaQ6WQJ1 1044 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Tas2r109Q7M707 316 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Rhpn2Q8BWR8 686 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Chst15Q91XQ5 561 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Tbrg4Q91YM4 630 aaKnown RBP11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Gtf2h1Q9DBA9 547 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 FancfE9Q5Z5 343 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 AfpP02772 605 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Tal1P22091 329 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Crabp2P22935 138 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Q32P12 615 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Q3UJP5 209 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Klra7Q60654 280 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Casc4Q6P2L7 435 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Tmem145Q8C4U2 746 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Dnm1lQ8K1M6 742 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Rbmx2Q8R0F5 326 aaKnown RBP11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 TgdsQ8VDR7 355 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Rsl24d1Q99L28 163 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Sipa1l2Q80TE4 1722 aa11.12□□□□□ -0.63
Ciita-201ENSMUST00000023147 Nav1Q8CH77 1875 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Gm5689F6Y2A6 97 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Akap1O08715 857 aaKnown RBP11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 PigrO70570 771 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Adam15O88839 864 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Cpa3P15089 417 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Hesx1Q61658 185 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Zdhhc24Q6IR37 284 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Q80WR5 230 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Acvr1cQ8K348 493 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Pglyrp2Q8VCS0 530 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Olfr1467Q8VFW1 308 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Pcdha3Q91Y16 942 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Stk33Q924X7 491 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Rpap3Q9D706 660 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Tmem45a2B7ZWJ5 289 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 March10E9PX79 788 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Myl4P09541 193 aaKnown RBP11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Oprl1P35377 367 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Rcsd1Q3UZA1 412 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 C1orf109Q499E6 217 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Dnajc1Q61712 552 aaKnown RBP11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Dlgap3Q6PFD5 977 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Trim50Q810I2 483 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Gtse1Q8R080 741 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Gtf2a1lQ8R4I4 468 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Mrpl57Q9CQF8 102 aaKnown RBP11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Hk2O08528 917 aaKnown RBP11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 ClockO08785 855 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 AdssP46664 456 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Rad54lP70270 747 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Arhgap45Q3TBD2 1116 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Cyp3a11Q64459 504 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Epn2Q8CHU3 595 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Washc1Q8VDD8 475 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Mfsd5Q921Y4 450 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Mta3Q924K8 591 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Sh3bp5lQ99LH9 392 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Klhl35Q9CZ49 574 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Asap1Q9QWY8 1147 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Stx7O70439 261 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Adcy1O88444 1118 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Fam196bQ6GQV1 535 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Kcnk18Q6VV64 394 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Fndc11Q80WB0 326 aa11.11□□□□□ -0.63
Ciita-201ENSMUST00000023147 Olfr395Q8VGR3 312 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms