RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cdyl2Q9D5D8 503 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tmem86aQ9D8N3 241 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pop5Q9DB28 169 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cyp4f14Q9EP75 524 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm11983V9GXS8 105 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Myo3aQ8K3H5 1613 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm5072A2AHM1 344 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm13941A2AJ38 245 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 A430078G23RikE9Q7Y4 484 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pkn1P70268 946 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Stt3bQ3TDQ1 823 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gpatch4Q3TFK5 415 aaKnown RBP9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 DstykQ6XUX1 927 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Camk1dQ8BW96 385 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Abi3Q8BYZ1 367 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 MceeQ9D1I5 178 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 4933425L06RikQ9D3Z8 585 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Hao1Q9WU19 370 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 EloblA6PWE0 161 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm5478D3Z6R0 159 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cyp2c68K7N6C2 491 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ube2e3P52483 207 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Larp7Q05CL8 570 aaKnown RBP9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 TraddQ3U0V2 310 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 PhgdhQ61753 533 aaKnown RBP9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dennd2aQ8C4S8 1000 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sfrp1Q8C4U3 314 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Arel1Q8CHG5 823 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Slc47a1Q8K0H1 567 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tmem82Q8R115 356 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Evi2bQ8VD58 444 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ndufs2Q91WD5 463 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Crtc3Q91X84 619 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 CenpnQ9CZW2 337 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Echdc3Q9D7J9 300 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pcna-ps2A0A140T8V5 261 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Slc16a6B1AT66 607 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ptch2O35595 1182 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nptx2O70340 429 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 AfpP02772 605 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kcnj6P48542 425 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 GsapQ3TCV3 858 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Itga1Q3V3R4 1179 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rassf5Q5EBH1 413 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 2900092C05RikQ5I0V9 184 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Proser1Q5PRE5 913 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dpf2Q61103 391 aaKnown RBP9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fnip1Q68FD7 1165 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rusc1Q8BG26 893 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ticam2Q8BJQ4 232 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gcfc2Q8BKT3 769 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam126bQ8C729 530 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Acvr1cQ8K348 493 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pitrm1Q8K411 1036 aaKnown RBP9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gmcl1Q920G9 524 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Syt12Q920N7 421 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ddit4Q9D3F7 229 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mrpl2Q9D773 306 aaKnown RBP9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nup50Q9JIH2 466 aaKnown RBP9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Bloc1s6Q9R0C0 172 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tarbp1E9Q368 1579 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Scgb2b21A0A087WQA9 112 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm21964A0A1W2P7S4 437 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 CenpaO35216 134 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Npy5rO70342 466 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rhbdl3P58873 404 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tsc22d1P62500 1077 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Syce2Q505B8 171 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ppp1r13lQ5I1X5 824 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dnajc1Q61712 552 aaKnown RBP9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 VwdeQ6DFV8 926 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ubxn7Q6P5G6 467 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zfp512bQ6PHP4 879 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tlr12Q6QNU9 906 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tmc8Q7TN58 722 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Luzp2Q8BGY3 345 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dnali1Q8BVN8 258 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Prmt5Q8CIG8 637 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Wrap53Q8VC51 532 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam49bQ921M7 324 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 GsdmcQ99NB5 468 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 PmpcbQ9CXT8 489 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Izumo2Q9DA16 220 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cep170Q6A065 1588 aa9.4□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kpna7C0LLJ0 499 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm20695H3BLK7 282 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slc2a13Q3UHK1 637 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ptger2Q62053 362 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 ChfrQ810L3 664 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pgm5Q8BZF8 567 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Wdr11Q8K1X1 1223 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cdc16Q8R349 620 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tmem161aQ8VCA6 480 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 TbccQ8VCN9 341 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mtmr6Q8VE11 617 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Stard13Q923Q2 1113 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dctn2Q99KJ8 402 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ribc2Q9D4Q1 309 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Wwp2Q9DBH0 870 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dhx34Q9DBV3 1145 aa9.4□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms