RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ANKRD52Q8NB46 1076 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 TMEM35BQ8NCS4 154 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 ITFG1Q8TB96 612 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 CPA5Q8WXQ8 436 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 ELSPBP1Q96BH3 223 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 SMARCD1Q96GM5 515 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 LOXL4Q96JB6 756 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 CLSTN3Q9BQT9 956 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 LHX5Q9H2C1 402 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 NAGPAQ9UK23 515 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 FBXW11Q9UKB1 542 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 REXO2Q9Y3B8 237 aaKnown RBP9.89□□□□□ -0.83
PHGDH-228ENST00000641847 PCDHB5Q9Y5E4 795 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 ASH1LQ9NR48 2969 aaKnown RBP9.89□□□□□ -0.83
PHGDH-228ENST00000641847 CHURC1-FNTBB4DL54 471 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 TM4SF5O14894 197 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 XPO1O14980 1071 aaKnown RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 AXIN1O15169 862 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 RTN2O75298 545 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 POU2F2P09086 479 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 BDNFP23560 247 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 CDH5P33151 784 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 GPD2P43304 727 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 MAGEA1P43355 309 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 FNTBP49356 437 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 NOVA1P51513 510 aaKnown RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 CACNA2D1P54289 1103 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 MAP3K7CLP57077 242 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 SLC8A3P57103 927 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 KRT83P78385 493 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 PDE4CQ08493 712 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 SMARCB1Q12824 385 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 GPR17Q13304 367 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 CFAP221Q4G0U5 840 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 PKDCCQ504Y2 493 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 ACAD10Q6JQN1 1059 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 PPP1R2P3Q6NXS1 205 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 CLEC20AQ6ZU45 233 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 DNAAF5Q86Y56 855 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 SPPL2BQ8TCT7 592 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 IPO4Q8TEX9 1081 aaKnown RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 C2orf15Q8WU43 125 aaKnown RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 FUBP3Q96I24 572 aaKnown RBP eCLIP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 NOX5Q96PH1 765 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 C11orf70Q9BRQ4 267 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 TRMT61BQ9BVS5 477 aaKnown RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 PACSIN1Q9BY11 444 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 DUSP16Q9BY84 665 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 ABCB6Q9NP58 842 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 DMAP1Q9NPF5 467 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 LUC7LQ9NQ29 371 aaKnown RBP9.88□□□□□ -0.83
PHGDH-228ENST00000641847 CYTH4Q9UIA0 394 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 PCDHA13Q9Y5I0 950 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
PHGDH-228ENST00000641847 F5P12259 2224 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 TULP2O00295 520 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 BEST1O76090 585 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 VNN2O95498 520 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 FTLP02792 175 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-228ENST00000641847 H2AFZP0C0S5 128 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 CCDC175P0C221 793 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 GZMAP12544 262 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 CYP2F1P24903 491 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 PLA2G4AP47712 749 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 RGS7P49802 495 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 VAV2P52735 878 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 SATB1Q01826 763 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 FOXC1Q12948 553 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 RAB33AQ14088 237 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 SF3A2Q15428 464 aaKnown RBP9.87□□□□□ -0.83
PHGDH-228ENST00000641847 PTPN20Q4JDL3 420 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 C10orf76Q5T2E6 689 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 DAB2IPQ5VWQ8 1189 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 RNF43Q68DV7 783 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 HEATR6Q6AI08 1181 aaKnown RBP9.87□□□□□ -0.83
PHGDH-228ENST00000641847 VSTM1Q6UX27 236 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 MMS22LQ6ZRQ5 1243 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 H2AFVQ71UI9 128 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 MON1BQ7L1V2 547 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 KIAA1328Q86T90 577 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 PIGZQ86VD9 579 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 PHF13Q86YI8 300 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-228ENST00000641847 WDTC1Q8N5D0 677 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 ATAD1Q8NBU5 361 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 MSANTD4Q8NCY6 345 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 SLC7A14Q8TBB6 771 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 ZNF653Q96CK0 615 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 MCRS1Q96EZ8 462 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 MSANTD3Q96H12 275 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 SEPT5Q99719 369 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-228ENST00000641847 SMOQ99835 787 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 ADAM33Q9BZ11 813 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 ISCUQ9H1K1 167 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 ARRDC1-AS1Q9H2J1 176 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 SYNCQ9H7C4 482 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 ZFP14Q9HCL3 533 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 ST7Q9NRC1 585 aa9.87□□□□□ -0.83
PHGDH-228ENST00000641847 TMEM30AQ9NV96 361 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms