RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 TMEM191BP0C7N4 346 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 CDK4P11802 303 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 SCP2P22307 547 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 GLDCP23378 1020 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 LMO2P25791 158 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 TRAPPC10P48553 1259 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 PCBP4P57723 403 aaKnown RBP8.32□□□□□ -1.08
PHGDH-217ENST00000641455 RBP5P82980 135 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 ORC1Q13415 861 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 ME3Q16798 604 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 SOWAHAQ2M3V2 549 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 ERICH1Q86X53 443 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 EID2Q8N6I1 236 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 ZNF248Q8NDW4 579 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 UCMAQ8WVF2 138 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 WBP2Q969T9 261 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 PCED1BQ96HM7 432 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 C8orf48Q96LL4 319 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 MMS19Q96T76 1030 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 FAM213AQ9BRX8 229 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 MMTAG2Q9BU76 263 aaKnown RBP8.32□□□□□ -1.08
PHGDH-217ENST00000641455 TRIM9Q9C026 710 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 FAM117AQ9C073 453 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 FOXP1Q9H334 677 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-217ENST00000641455 C6orf106Q9H6K1 298 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-217ENST00000641455 CCSER2Q9H7U1 834 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.32□□□□□ -1.088e-8■■■■□ 25.6
PHGDH-217ENST00000641455 GDAP2Q9NXN4 497 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 PLK2Q9NYY3 685 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 CHORDC1Q9UHD1 332 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-217ENST00000641455 LSM7Q9UK45 103 aaKnown RBP8.32□□□□□ -1.08
PHGDH-217ENST00000641455 ITGA11Q9UKX5 1188 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 DOPEY2Q9Y3R5 2298 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 TP53BP1Q12888 1972 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-217ENST00000641455 RTN3O95197 1032 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-217ENST00000641455 ADSSP30520 456 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 ABCD1P33897 745 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 CTSKP43235 329 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 ACADVLP49748 655 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 CDH8P55286 799 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 WNT7BP56706 349 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 ARSHQ5FYA8 562 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 COLEC12Q5KU26 742 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 PRAMEF14Q5SWL7 426 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 C6orf132Q5T0Z8 1188 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 FBXL19Q6PCT2 694 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 CRELD2Q6UXH1 353 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-217ENST00000641455 KDM7AQ6ZMT4 941 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 NUP93Q8N1F7 819 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 MYCBPAPQ8TBZ2 947 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 KCNE4Q8WWG9 221 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 SAAL1Q96ER3 474 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 MED8Q96G25 268 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 ACE2Q9BYF1 805 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-217ENST00000641455 ZNF518BQ9C0D4 1074 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 MTMR12Q9C0I1 747 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 PCED1AQ9H1Q7 454 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 LHX5Q9H2C1 402 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 SNX25Q9H3E2 840 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 RBAKQ9NYW8 714 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-217ENST00000641455 IL17BQ9UHF5 180 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 CLCA2Q9UQC9 943 aa8.31□□□□□ -1.08
PHGDH-217ENST00000641455 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-217ENST00000641455 UNC79Q9P2D8 2635 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 A0A1B0GTQ1 180 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 CLDN5O00501 218 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 KLK10O43240 276 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 DFNA5O60443 496 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 SEMA4FO95754 770 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 EPHX1P07099 455 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 ACSL1P33121 698 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 CACNA2D1P54289 1103 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 GTF2BQ00403 316 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 POU5F1Q01860 360 aaKnown RBP8.3□□□□□ -1.08
PHGDH-217ENST00000641455 ARID5AQ03989 594 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 GOLGA8FQ08AF8 430 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 GOLGA8DPQ0D2H9 430 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 NFATC3Q12968 1075 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 POSTNQ15063 836 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 IL17AQ16552 155 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 KCNT1Q5JUK3 1230 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 SCARA3Q6AZY7 606 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 SERPINA13PQ6UXR4 307 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 DPH6Q7L8W6 267 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 BRSK2Q8IWQ3 736 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 DHX40Q8IX18 779 aaKnown RBP8.3□□□□□ -1.08
PHGDH-217ENST00000641455 OR6B3Q8NGW1 331 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 KBTBD7Q8WVZ9 684 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 OVCA2Q8WZ82 227 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 TTC9Q92623 222 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 KCNN1Q92952 543 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 BIRC7Q96CA5 298 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 HPDLQ96IR7 371 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.3□□□□□ -1.08
PHGDH-217ENST00000641455 CIPCQ9C0C6 399 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 ELOVL4Q9GZR5 314 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 IKZF4Q9H2S9 585 aa8.3□□□□□ -1.08
PHGDH-217ENST00000641455 MARK1Q9P0L2 795 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms