RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 I3L4J1 428 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 M0QYT0 321 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 NCAM2O15394 837 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 PPFIA2O75334 1257 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 DGKIO75912 1065 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SASH3O75995 380 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 BEST1O76090 585 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 KRT14P02533 472 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 ITGB1P05556 798 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 MYBL2P10244 700 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SLC2A3P11169 496 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 NCAM1P13591 858 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 KRT10P13645 584 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TCF4P15884 667 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 RAG1P15918 1043 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 ADCY8P40145 1251 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TUFMP49411 452 aaKnown RBP10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SLC5A3P53794 718 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 BCAR1P56945 870 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 OTUD4Q01804 1114 aaKnown RBP10.11□□□□□ -0.79
PHGDH-215ENST00000641371 ROR1Q01973 937 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 MORF4L2Q15014 288 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TAF5Q15542 800 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 ANKRD20A8PQ5CZ79 823 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 KCNT1Q5JUK3 1230 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 DAB2IPQ5VWQ8 1189 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 BTBD8Q5XKL5 378 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TXNRD3NBQ6F5E7 133 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 MFSD5Q6N075 450 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 PPP1R21Q6ZMI0 780 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TRMT10CQ7L0Y3 403 aaKnown RBP10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TADA2BQ86TJ2 420 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 HOOK3Q86VS8 718 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 RELL1Q8IUW5 271 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 ACTL9Q8TC94 416 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 PIK3R5Q8WYR1 880 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TOP1MTQ969P6 601 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SCLYQ96I15 445 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SERPINB11Q96P15 392 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 PEBP4Q96S96 227 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 EPAS1Q99814 870 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 LPIN3Q9BQK8 851 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 DPH5Q9H2P9 285 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 DHX35Q9H5Z1 703 aaKnown RBP10.11□□□□□ -0.79
PHGDH-215ENST00000641371 ZDHHC18Q9NUE0 388 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 KLHL11Q9NVR0 708 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 MARCH5Q9NX47 278 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 IL37Q9NZH6 218 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 DNAJB4Q9UDY4 337 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 FZD10Q9ULW2 581 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SHOC2Q9UQ13 582 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 SNX24Q9Y343 169 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 NEU2Q9Y3R4 380 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 FAM92AA1XBS5 289 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 BCLAF3A2AJT9 711 aaKnown RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 ZSCAN5CA6NGD5 496 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 A6NNZ2 444 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 SGK1O00141 431 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 EIF3HO15372 352 aaKnown RBP eCLIP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 TBC1D4O60343 1298 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 RBP3P10745 1247 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 RARGP13631 454 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 CPB1P15086 417 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 KLRC2P26717 231 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 ECHS1P30084 290 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 L1CAMP32004 1257 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 SERPINB6P35237 376 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 RPL21P46778 160 aaKnown RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 KCNJ1P48048 391 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 KPNA1P52294 538 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 PLTPP55058 493 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 EIF3EP60228 445 aaKnown RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 PPIGQ13427 754 aaKnown RBP eCLIP10.1□□□□□ -0.796e-8■□□□□ 10.1
PHGDH-215ENST00000641371 SNX1Q13596 522 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 TUBB8Q3ZCM7 444 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 BSPRYQ5W0U4 402 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 TPGS2Q68CL5 300 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 SLC8B1Q6J4K2 584 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 MSANTD2Q6P1R3 559 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 TMC3Q7Z5M5 1100 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 DEFB128Q7Z7B8 93 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 LRRTM3Q86VH5 581 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 ZNF276Q8N554 614 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 PDZD8Q8NEN9 1154 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 SLC7A14Q8TBB6 771 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 CLEC4CQ8WTT0 213 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 RNF139Q8WU17 664 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 ATG4AQ8WYN0 398 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 OVCA2Q8WZ82 227 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 RTP4Q96DX8 246 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 TMEM169Q96HH4 297 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 PAWRQ96IZ0 340 aaKnown RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 TTC25Q96NG3 672 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 ZNF558Q96NG5 402 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 KCNK16Q96T55 309 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 TRIM31Q9BZY9 425 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms