RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
PHGDH-212ENST00000641247 SAAL1Q96ER3 474 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 C8orf48Q96LL4 319 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 MRPL45Q9BRJ2 306 aaKnown RBP10.3□□□□□ -0.76
PHGDH-212ENST00000641247 ORAI3Q9BRQ5 295 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 C6orf106Q9H6K1 298 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-212ENST00000641247 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.3□□□□□ -0.76
PHGDH-212ENST00000641247 BLOC1S4Q9NUP1 217 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 KCND2Q9NZV8 630 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 PRDM4Q9UKN5 801 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 CDH9Q9ULB4 789 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 ANKRD6Q9Y2G4 727 aa10.3□□□□□ -0.76
PHGDH-212ENST00000641247 MYO18BQ8IUG5 2567 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 MUC22E2RYF6 1773 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-212ENST00000641247 CEP192Q8TEP8 1941 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 MYOFQ9NZM1 2061 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 B8ZZF3 427 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 NEDD8-MDP1E9PL57 170 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 CLDN5O00501 218 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 ZBTB24O43167 697 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-212ENST00000641247 PCDHGA12O60330 932 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 CACNG3O60359 315 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 TBX18O95935 607 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 KRT19P08727 400 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 TYRP14679 529 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 PCSK1P29120 753 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 PPP3CCP48454 512 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 POU5F1Q01860 360 aaKnown RBP10.29□□□□□ -0.76
PHGDH-212ENST00000641247 SUZ12Q15022 739 aaKnown RBP10.29□□□□□ -0.76
PHGDH-212ENST00000641247 SF3A1Q15459 793 aaKnown RBP10.29□□□□□ -0.76
PHGDH-212ENST00000641247 SHBQ15464 509 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 MDH1BQ5I0G3 518 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 TDRD10Q5VZ19 366 aaKnown RBP10.29□□□□□ -0.76
PHGDH-212ENST00000641247 GPBP1Q86WP2 473 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 CACUL1Q86Y37 369 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 NT5DC4Q86YG4 428 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 GATAD2AQ86YP4 633 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 TMPRSS6Q8IU80 811 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 LRRC52Q8N7C0 313 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 SCAMP5Q8TAC9 235 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 MYCBPAPQ8TBZ2 947 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 OTUB2Q96DC9 234 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 NXPE2Q96DL1 559 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 KCNK16Q96T55 309 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 FAM213AQ9BRX8 229 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 ZNF518BQ9C0D4 1074 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 DPEP3Q9H4B8 488 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 PARVGQ9HBI0 331 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 PLK2Q9NYY3 685 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 TFIP11Q9UBB9 837 aaKnown RBP10.29□□□□□ -0.76
PHGDH-212ENST00000641247 RCOR1Q9UKL0 485 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 ODF2LQ9ULJ1 636 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 SH3BP1Q9Y3L3 701 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 PTPRJQ12913 1337 aa10.29□□□□□ -0.76
PHGDH-212ENST00000641247 GOLGA8IPA6NC78 632 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 GOLGA8JA6NMD2 632 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 ERVH48-1M5A8F1 160 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 GFRA2O00451 464 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 RRP8O43159 456 aaKnown RBP10.28□□□□□ -0.76
PHGDH-212ENST00000641247 FAM13AO94988 1023 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 IL18RAPO95256 599 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 WISP1O95388 367 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 IGLV3-19P01714 112 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 ACO1P21399 889 aaKnown RBP10.28□□□□□ -0.76
PHGDH-212ENST00000641247 ANXA13P27216 316 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 ACSL1P33121 698 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 PRPHP41219 470 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 GRK6P43250 576 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 ENPP2Q13822 863 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 MCM6Q14566 821 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 TAF1BQ53T94 588 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-212ENST00000641247 C6orf118Q5T5N4 469 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 SLFN12LQ6IEE8 588 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 FAM124AQ86V42 546 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 ERICH1Q86X53 443 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 DDX42Q86XP3 938 aaKnown RBP eCLIP10.28□□□□□ -0.76
PHGDH-212ENST00000641247 BRSK2Q8IWQ3 736 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 OR5B17Q8NGF7 314 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 SCFD1Q8WVM8 642 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 POMGNT1Q8WZA1 660 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 FGF11Q92914 225 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 BHMTQ93088 406 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 SPATA32Q96LK8 384 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 CEP295NLQ96MC4 621 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 USP28Q96RU2 1077 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 DUSP9Q99956 384 aaKnown RBP10.28□□□□□ -0.76
PHGDH-212ENST00000641247 STRA6Q9BX79 667 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 BBS2Q9BXC9 721 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 B3GNT5Q9BYG0 378 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 RAB34Q9BZG1 259 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 MTMR12Q9C0I1 747 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 ZHX3Q9H4I2 956 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 CPNE5Q9HCH3 593 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 PDE11AQ9HCR9 933 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 TM9SF3Q9HD45 589 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 FBXO10Q9UK96 956 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 CLEC4EQ9ULY5 219 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 PTPRQQ9UMZ3 2332 aa10.28□□□□□ -0.76
PHGDH-212ENST00000641247 BRINP1O60477 761 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms