RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MYO18AQ92614 2054 aaKnown RBP17.73■□□□□ 0.43
PHGDH-211ENST00000641213 PTGESO14684 152 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 XPO1O14980 1071 aaKnown RBP17.72■□□□□ 0.43
PHGDH-211ENST00000641213 DNAJC8O75937 253 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-211ENST00000641213 GSTA1P08263 222 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 GNAT1P11488 350 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 GBE1Q04446 702 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 EFHC1Q5JVL4 640 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 FAXCQ5TGI0 409 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 FAM228AQ86W67 206 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 FUKQ8N0W3 1084 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 HNRNPABQ99729 332 aaKnown RBP17.72■□□□□ 0.43
PHGDH-211ENST00000641213 PITPNM3Q9BZ71 974 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 KLC2Q9H0B6 622 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.72■□□□□ 0.43
PHGDH-211ENST00000641213 GTF2IRD1Q9UHL9 959 aa17.72■□□□□ 0.43
PHGDH-211ENST00000641213 TCRBV9S1A1TA0A576 114 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 RASSF9O75901 435 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 LRPAP1P30533 357 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 HNRNPH1P31943 449 aaKnown RBP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 RGS2P41220 211 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 MATKP42679 507 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 MAGEA6P43360 314 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 YWHAZP63104 245 aaKnown RBP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 XRCC4Q13426 336 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 FAM47EQ6ZV65 393 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 STRADAQ7RTN6 431 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 PIGZQ86VD9 579 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 CDKL3Q8IVW4 592 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 CCDC110Q8TBZ0 833 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 GRAMD1AQ96CP6 724 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 CSPG4P5Q96PW8 444 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 PPP1R10Q96QC0 940 aaKnown RBP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 DUSP16Q9BY84 665 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 FRMD8Q9BZ67 464 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 SLC40A1Q9NP59 571 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 IGHA2P01877 340 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 ZFXP17010 805 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 YWHAGP61981 247 aaKnown RBP eCLIP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 PDK4Q16654 411 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 SLC45A4Q5BKX6 768 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 C17orf99Q6UX52 265 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 RGS9BPQ6ZS82 235 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 RASAL3Q86YV0 1011 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 DEFB106AQ8N104 65 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 NDRG1Q92597 394 aaKnown RBP17.71■□□□□ 0.43
PHGDH-211ENST00000641213 ZFP42Q96MM3 310 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 ETNK1Q9HBU6 452 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 GGT7Q9UJ14 662 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 SCN10AQ9Y5Y9 1956 aa17.71■□□□□ 0.43
PHGDH-211ENST00000641213 CLDN5O00501 218 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 CYB561D2O14569 222 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 SPAG6O75602 509 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 IGFBP6P24592 240 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-211ENST00000641213 ACAT1P24752 427 aaKnown RBP17.7■□□□□ 0.42
PHGDH-211ENST00000641213 NR2C2P49116 596 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 ADIGQ0VDE8 80 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 DNAJC3Q13217 504 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 KBTBD12Q3ZCT8 623 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
PHGDH-211ENST00000641213 HHATQ5VTY9 493 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 CAND1Q86VP6 1230 aaKnown RBP17.7■□□□□ 0.42
PHGDH-211ENST00000641213 APBA2Q99767 749 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 PNPLA8Q9NP80 782 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 HAUS2Q9NVX0 235 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 USP3Q9Y6I4 520 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 GCATO75600 419 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 CAPN15O75808 1086 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 BEST1O76090 585 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 UBOX5O94941 541 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 ZWINTO95229 277 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 APRTP07741 180 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 PTPN1P18031 435 aaKnown RBP17.7■□□□□ 0.42
PHGDH-211ENST00000641213 GBP2P32456 591 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-211ENST00000641213 SULT1E1P49888 294 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 SLC25A52Q3SY17 297 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 WSCD1Q658N2 575 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 LVRNQ6Q4G3 990 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 C4orf22Q6V702 233 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 PAQR9Q6ZVX9 377 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 PYROXD2Q8N2H3 581 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 SLC44A1Q8WWI5 657 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 SPOCK2Q92563 424 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 FZD10Q9ULW2 581 aa17.7■□□□□ 0.42
PHGDH-211ENST00000641213 MYADML2A6NDP7 307 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 MEIS3P2A8K0S8 358 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 GOT1P17174 413 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 NPR3P17342 541 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 AMPD1P23109 780 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 ZNF157P51786 506 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-211ENST00000641213 GALNTL6Q49A17 601 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 NCBP2-AS2Q69YL0 99 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 KCNT2Q6UVM3 1135 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 FAM131BQ86XD5 332 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 CCDC33Q8N5R6 958 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 BANPQ8N9N5 519 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 FAM149B1Q96BN6 582 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 CFAP36Q96G28 342 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 QKIQ96PU8 341 aaKnown RBP eCLIP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms