RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	TRADD	Q15628	312 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	CLUL1	Q15846	466 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	BTBD8	Q5XKL5	378 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	TTC27	Q6P3X3	843 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	STRADA	Q7RTN6	431 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	PYROXD2	Q8N2H3	581 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	HAUS1	Q96CS2	278 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	SLC9A7	Q96T83	725 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	HERC2P3	Q9BVR0	1158 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	CYP4F11	Q9HBI6	524 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	DDIT4	Q9NX09	232 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	SFMBT1	Q9UHJ3	866 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	CHD7	Q9P2D1	2997 aa		10.9	□□□□□ -0.66
NECAP1-223	ENST00000640091	ESYT3	A0FGR9	886 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	TEX28	O15482	410 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	TTI1	O43156	1089 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	ENDOD1	O94919	500 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	ARHGEF15	O94989	841 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	ATF2	P15336	505 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	IL4R	P24394	825 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	YWHAQ	P27348	245 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	RDX	P35241	583 aa	Known RBP	10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	VSNL1	P62760	191 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	TAF10	Q12962	218 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	KRT81	Q14533	505 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	CCDC70	Q6NSX1	233 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	CCDC137	Q6PK04	289 aa	Known RBP	10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	TMC7	Q7Z402	723 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	BNIPL	Q7Z465	357 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	SCML4	Q8N228	414 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	PHOSPHO2	Q8TCD6	241 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	C2orf15	Q8WU43	125 aa	Known RBP	10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	FBXO44	Q9H4M3	255 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	DHX35	Q9H5Z1	703 aa	Known RBP	10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	ANLN	Q9NQW6	1124 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	ABCC13	Q9NSE7	274 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	GMIP	Q9P107	970 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	AFF4	Q9UHB7	1163 aa	Known RBP	10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	SCML2	Q9UQR0	700 aa		10.9	□□□□□ -0.67
NECAP1-223	ENST00000640091	CST8	O60676	142 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	TJP3	O95049	919 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	L1CAM	P32004	1257 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	ARSE	P51690	589 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	ERVFC1	P60507	584 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	COPS2	P61201	443 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	GUCY2D	Q02846	1103 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	DPYSL3	Q14195	570 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	SHH	Q15465	462 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	RASIP1	Q5U651	963 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	FBXO38	Q6PIJ6	1188 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	MON1A	Q86VX9	555 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	CCDC105	Q8IYK2	499 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	SP7	Q8TDD2	431 aa	Predicted RBP	10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	ANKRD7	Q92527	254 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	C17orf80	Q9BSJ5	609 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	FAM204A	Q9H8W3	233 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	WDR6	Q9NNW5	1121 aa	Known RBP	10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	AP4E1	Q9UPM8	1137 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	CEP290	O15078	2479 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	PTPRD	P23468	1912 aa		10.89	□□□□□ -0.67
NECAP1-223	ENST00000640091	LINC01553	A4QN01	128 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091		I6L893	689 aa	Predicted RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	MDM4	O15151	490 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	MSI1	O43347	362 aa	Known RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	LILRB3	O75022	631 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	PHF2	O75151	1096 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	HEXIM1	O94992	359 aa	Known RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	CXCL14	O95715	111 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	TBX18	O95935	607 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	CNP	P09543	421 aa	Known RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	CTNNB1	P35222	781 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	BMPR1A	P36894	532 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	COIL	P38432	576 aa	Predicted RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	TUFM	P49411	452 aa	Known RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	RPL10A	P62906	217 aa	Known RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	RAB33A	Q14088	237 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	TAC4	Q86UU9	113 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	RFX6	Q8HWS3	928 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	DQX1	Q8TE96	717 aa	Known RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	TEKT4	Q8WW24	435 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	CASP10	Q92851	521 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	FBXO32	Q969P5	355 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	SPATA17	Q96L03	361 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	NCAPG	Q9BPX3	1015 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	MAK16	Q9BXY0	300 aa	Known RBP	10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	ZBP1	Q9H171	429 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	WDCP	Q9H6R7	721 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	PCDH18	Q9HCL0	1135 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	EPB41L5	Q9HCM4	733 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	MTMR10	Q9NXD2	777 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	IL37	Q9NZH6	218 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	STIM2	Q9P246	746 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	FZD10	Q9ULW2	581 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	SLC38A8	A6NNN8	435 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	PRRG1	O14668	218 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	CTSA	P10619	480 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	DNAJB1	P25685	340 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	CHRNA3	P32297	505 aa		10.88	□□□□□ -0.67
NECAP1-223	ENST00000640091	MAGEA10	P43363	369 aa	Predicted RBP	10.88	□□□□□ -0.67

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