RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 NCKAP1LP55160 1127 aa17.16■□□□□ 0.34
SCARB2-210ENST00000638567 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
SCARB2-210ENST00000638567 MFSD5Q6N075 450 aa17.16■□□□□ 0.34
SCARB2-210ENST00000638567 APLFQ8IW19 511 aaPredicted RBP17.16■□□□□ 0.34
SCARB2-210ENST00000638567 HTR3CQ8WXA8 447 aa17.16■□□□□ 0.34
SCARB2-210ENST00000638567 CNDP1Q96KN2 507 aa17.16■□□□□ 0.34
SCARB2-210ENST00000638567 KLHL4Q9C0H6 718 aa17.16■□□□□ 0.34
SCARB2-210ENST00000638567 TCF7L2Q9NQB0 619 aa17.16■□□□□ 0.34
SCARB2-210ENST00000638567 hCG_1818297A0A087WSY0 165 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 ANXA9O76027 345 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 C6orf222P0C671 652 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 PLOD1Q02809 727 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 CYLC2Q14093 348 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 DGKDQ16760 1214 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 APBB2Q92870 758 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 CATSPERBQ9H7T0 1116 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 ACOT9Q9Y305 439 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 ATXN2Q99700 1313 aaKnown RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 A0A0B4J269 797 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 F8W8V4 182 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 SLC26A2P50443 739 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 ABCE1P61221 599 aaKnown RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 RNF148Q8N7C7 305 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 MIEF2Q96C03 454 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 SPATC1LQ9H0A9 340 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 SIX2Q9NPC8 291 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 MRGBPQ9NV56 204 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 AFF4Q9UHB7 1163 aaKnown RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 NKRFO15226 690 aaKnown RBP eCLIP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 DCXO43602 365 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 NDUFS3O75489 264 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 MT-CO1P00395 513 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 TDRD5Q8NAT2 981 aaKnown RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 CACYBPQ9HB71 228 aaKnown RBP17.15■□□□□ 0.34
SCARB2-210ENST00000638567 FZD1Q9UP38 647 aa17.15■□□□□ 0.34
SCARB2-210ENST00000638567 E7ENQ6 273 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 TPH1P17752 444 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 ETFBP38117 255 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 TNFSF9P41273 254 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 PTDSS1P48651 473 aaKnown RBP17.14■□□□□ 0.34
SCARB2-210ENST00000638567 BBS12Q6ZW61 710 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 OTOAQ7RTW8 1153 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 C2orf69Q8N8R5 385 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 GPRC5AQ8NFJ5 357 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 RFWD2Q8NHY2 731 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 JADE3Q92613 823 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 ACSS3Q9H6R3 686 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 VANGL2Q9ULK5 521 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 SNX13Q9Y5W8 968 aa17.14■□□□□ 0.34
SCARB2-210ENST00000638567 ALOX15BO15296 676 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 EDF1O60869 148 aaKnown RBP17.14■□□□□ 0.33
SCARB2-210ENST00000638567 USP12O75317 370 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 ITGAVP06756 1048 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 BST2Q10589 180 aaKnown RBP17.14■□□□□ 0.33
SCARB2-210ENST00000638567 CLEC4FQ8N1N0 589 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 EFHBQ8N7U6 833 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 USP13Q92995 863 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-210ENST00000638567 TLCD1Q96CP7 247 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 MFSD14AQ96MC6 490 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 SLC38A7Q9NVC3 462 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 IRAK4Q9NWZ3 460 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 RRN3P2A6NIE6 340 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 PSMG1O95456 288 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 PROCP04070 461 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 BST1Q10588 318 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 HELQQ8TDG4 1101 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 DTNBP1Q96EV8 351 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 ASB7Q9H672 318 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 LRRC4CQ9HCJ2 640 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 CREB1P16220 341 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 PTPN7P35236 360 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 MMRN1Q13201 1228 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 LBRQ14739 615 aaKnown RBP17.14■□□□□ 0.33
SCARB2-210ENST00000638567 ANKRD13AQ8IZ07 590 aa17.14■□□□□ 0.33
SCARB2-210ENST00000638567 NMD3Q96D46 503 aaKnown RBP17.14■□□□□ 0.33
SCARB2-210ENST00000638567 FBXO6Q9NRD1 293 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-210ENST00000638567 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 SUPT3HB4E1H0 165 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 MAP4P27816 1152 aaKnown RBP17.13■□□□□ 0.33
SCARB2-210ENST00000638567 HMOX2P30519 316 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 MLH1P40692 756 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 DGKZQ13574 1117 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 ACAP1Q15027 740 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 FBXO47Q5MNV8 452 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 FKBP1CQ5VVH2 108 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 ADGRF2Q8IZF7 708 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 KCNK4Q9NYG8 393 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 A0A096LPK6 155 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 RNF103O00237 685 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 KRT36O76013 467 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 MYCP01106 439 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-210ENST00000638567 PTK2BQ14289 1009 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 ACCSLQ4AC99 568 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 AGAP9Q5VTM2 703 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 FAM136AQ96C01 138 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 ZNF184Q99676 751 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms