RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 HOOK3Q86VS8 718 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 CCDC25Q86WR0 208 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FAM131BQ86XD5 332 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 NUP93Q8N1F7 819 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TMEM199Q8N511 208 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC35B2Q8TB61 432 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ACTL9Q8TC94 416 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FBXO25Q8TCJ0 367 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 SPPL2BQ8TCT7 592 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 RNF139Q8WU17 664 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ART4Q93070 314 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 NTAN1Q96AB6 310 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PGAP3Q96FM1 320 aaPredicted RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 C8orf48Q96LL4 319 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PEBP4Q96S96 227 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 KCNK16Q96T55 309 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 NPY6RQ99463 290 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PKMYT1Q99640 499 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 HERPUD2Q9BSE4 406 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TTPALQ9BTX7 342 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 C11orf84Q9BUA3 381 aaPredicted RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 WDCPQ9H6R7 721 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PCDH9Q9HC56 1237 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PCDH18Q9HCL0 1135 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PRDM5Q9NQX1 630 aaPredicted RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ZDHHC18Q9NUE0 388 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 COMMD8Q9NX08 183 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 DDIT4Q9NX09 232 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 GRHL1Q9NZI5 618 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 COX16Q9P0S2 106 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 STK39Q9UEW8 545 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FAM153AQ9UHL3 310 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TBX21Q9UL17 535 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TPX2Q9ULW0 747 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FZD10Q9ULW2 581 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 R3HDM2Q9Y2K5 976 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ATP8A1Q9Y2Q0 1164 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 MYO16Q9Y6X6 1858 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 SCN5AQ14524 2016 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PTPRDP23468 1912 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 MICAL3Q7RTP6 2002 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 FNDC1Q4ZHG4 1894 aaPredicted RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 YJEFN3A6XGL0 299 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 HACD1B0YJ81 288 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 HHLA1C9JL84 531 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 E7ENQ6 273 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 EEF2KO00418 725 aaKnown RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 DNALI1O14645 258 aaPredicted RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 POLR3GO15318 223 aaPredicted RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 PPFIA2O75334 1257 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 TIMP1P01033 207 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 IFNB1P01574 187 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 GALTP07902 379 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 CD48P09326 243 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 MYZAPP0CAP1 466 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 RARGP13631 454 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 RAG1P15918 1043 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 CYP2F1P24903 491 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ECHS1P30084 290 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 L1CAMP32004 1257 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 HSD17B3P37058 310 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 GGCXP38435 758 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 CTCFP49711 727 aaPredicted RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 VPS41P49754 854 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 PSEN1P49768 467 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 CDR1P51861 262 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ITGA8P53708 1063 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC5A3P53794 718 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ARPP19P56211 112 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 C1QTNF8P60827 252 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 YWHAGP61981 247 aaKnown RBP eCLIP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 RPL10AP62906 217 aaKnown RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 XRCC4Q13426 336 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 GPNMBQ14956 572 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 MORF4L2Q15014 288 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 NOMO1Q15155 1222 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 OASLQ15646 514 aaKnown RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 CCDC142Q17RM4 750 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 P3H1Q32P28 736 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 USP41Q3LFD5 358 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 BSPRYQ5W0U4 402 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC9A4Q6AI14 798 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ZDHHC24Q6UX98 284 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 PPP1R21Q6ZMI0 780 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ANKS1BQ7Z6G8 1248 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 CCDC185Q8N715 623 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ZMIZ2Q8NF64 920 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 NT5C3BQ969T7 300 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 FAF2Q96CS3 445 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 PAWRQ96IZ0 340 aaKnown RBP6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 CEP295NLQ96MC4 621 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ZNF558Q96NG5 402 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 ZIM3Q96PE6 472 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 EPAS1Q99814 870 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 FAM118BQ9BPY3 351 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 TMEM121Q9BTD3 319 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 RHOBTB2Q9BYZ6 727 aa6.54□□□□□ -1.36
CACNA1D-227ENST00000637844 STMN4Q9H169 189 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms