RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PARD6AQ9NPB6 346 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 DNAJC17Q9NVM6 304 aaKnown RBP19.91■□□□□ 0.78
CLN6-221ENST00000637494 DLL3Q9NYJ7 618 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 CHMP5Q9NZZ3 219 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 PCDHB4Q9Y5E5 795 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 OTOGLQ3ZCN5 2332 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 EP300Q09472 2414 aaPredicted RBP19.9■□□□□ 0.78
CLN6-221ENST00000637494 ZBED1O96006 694 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 PAEPP09466 180 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 SETSIPP0DME0 302 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 GBP1P32455 592 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 CHKAP35790 457 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 STX17P56962 302 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 PDE4CQ08493 712 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 EFEMP1Q12805 493 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 RAB41Q5JT25 222 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 C10orf76Q5T2E6 689 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 TMEM270Q6UE05 265 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 PRR23CQ6ZRP0 262 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 ETFBKMTQ8IXQ9 262 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 SIX6OS1Q8N1H7 587 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 IL17RCQ8NAC3 791 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 ZC3H10Q96K80 434 aaKnown RBP19.9■□□□□ 0.78
CLN6-221ENST00000637494 ARRDC1-AS1Q9H2J1 176 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 OLA1Q9NTK5 396 aaKnown RBP19.9■□□□□ 0.78
CLN6-221ENST00000637494 BCCIPQ9P287 314 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-221ENST00000637494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-221ENST00000637494 KIAA1549LQ6ZVL6 1849 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 ATG2BQ96BY7 2078 aa19.9■□□□□ 0.78
CLN6-221ENST00000637494 ZBTB24O43167 697 aaPredicted RBP19.89■□□□□ 0.77
CLN6-221ENST00000637494 STC2O76061 302 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 EPN2O95208 641 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 TYRP14679 529 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 TGM1P22735 817 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 STILQ15468 1287 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 SDE2Q6IQ49 451 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 ZNF513Q8N8E2 541 aaPredicted RBP19.89■□□□□ 0.77
CLN6-221ENST00000637494 TERB1Q8NA31 727 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 C12orf50Q8NA57 414 aaPredicted RBP19.89■□□□□ 0.77
CLN6-221ENST00000637494 NETO1Q8TDF5 533 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 CNOT6LQ96LI5 555 aaKnown RBP19.89■□□□□ 0.77
CLN6-221ENST00000637494 RTKNQ9BST9 563 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 SRRTQ9BXP5 876 aaKnown RBP19.89■□□□□ 0.77
CLN6-221ENST00000637494 TPSD1Q9BZJ3 242 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 ULBP1Q9BZM6 244 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 MARK1Q9P0L2 795 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 MARCH2Q9P0N8 246 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 PCDHGA5Q9Y5G8 931 aa19.89■□□□□ 0.77
CLN6-221ENST00000637494 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.89■□□□□ 0.77
CLN6-221ENST00000637494 CACNG3O60359 315 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 GREM1O60565 184 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 AFPP02771 609 aaKnown RBP19.88■□□□□ 0.77
CLN6-221ENST00000637494 BMP6P22004 513 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 KIR2DL1P43626 348 aaPredicted RBP19.88■□□□□ 0.77
CLN6-221ENST00000637494 KCNH2Q12809 1159 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 BYSLQ13895 437 aaKnown RBP19.88■□□□□ 0.77
CLN6-221ENST00000637494 PLK5Q496M5 336 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 AASDHQ4L235 1098 aaPredicted RBP19.88■□□□□ 0.77
CLN6-221ENST00000637494 EMC10Q5UCC4 262 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 PGBD3Q8N328 593 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 PHTF2Q8N3S3 785 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 UBA3Q8TBC4 463 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 RNF139Q8WU17 664 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 SPACA7Q96KW9 195 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 KIAA1468Q9P260 1216 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 ZNF292O60281 2723 aa19.88■□□□□ 0.77
CLN6-221ENST00000637494 SLC12A8A0AV02 714 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 SGK1O00141 431 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 O00370 1275 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 CYBBP04839 570 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 HMBSP08397 361 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 CORO1AP31146 461 aaKnown RBP19.87■□□□□ 0.77
CLN6-221ENST00000637494 DGKGP49619 791 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 MARSP56192 900 aaKnown RBP19.87■□□□□ 0.77
CLN6-221ENST00000637494 ADIGQ0VDE8 80 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 MESP2Q0VG99 397 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 PM20D1Q6GTS8 502 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 LCLAT1Q6UWP7 414 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 Q6ZNB5 142 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 RASSF3Q86WH2 238 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 CREBRFQ8IUR6 639 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 SFTPA1Q8IWL2 248 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 TRIM59Q8IWR1 403 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 UBR7Q8N806 425 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 EHBP1Q8NDI1 1231 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 KCTD13Q8WZ19 329 aa19.87■□□□□ 0.77
CLN6-221ENST00000637494 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.86■□□□□ 0.77
CLN6-221ENST00000637494 ZNF806P0C7X5 589 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 GCNT1Q02742 428 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 CNGA2Q16280 664 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 CAMK4Q16566 473 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 TMEM92Q6UXU6 159 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 RBBP8NLQ8NC74 664 aaPredicted RBP19.86■□□□□ 0.77
CLN6-221ENST00000637494 MDGA1Q8NFP4 955 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 GOLGA1Q92805 767 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 PLD4Q96BZ4 506 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 DUSP15Q9H1R2 295 aaPredicted RBP19.86■□□□□ 0.77
CLN6-221ENST00000637494 CNGB3Q9NQW8 809 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 ABCC13Q9NSE7 274 aa19.86■□□□□ 0.77
CLN6-221ENST00000637494 RWDD2AQ9UIY3 292 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms