RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 DCDC2BA2VCK2 349 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 DCLK1O15075 740 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 MDM4O15151 490 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 PGFP49763 221 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 PMS1P54277 932 aaKnown RBP18.84■□□□□ 0.61
PNKP-225ENST00000636214 BCAT1P54687 386 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 RAD23BP54727 409 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 COG7P83436 770 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 BYSLQ13895 437 aaKnown RBP18.84■□□□□ 0.61
PNKP-225ENST00000636214 CCDC6Q16204 474 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 SGO2Q562F6 1265 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 ARHGAP17Q68EM7 881 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 ISM2Q6H9L7 571 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 SDE2Q6IQ49 451 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 KLHL10Q6JEL2 608 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 RASSF3Q86WH2 238 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 ETFBKMTQ8IXQ9 262 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 ZC3H3Q8IXZ2 948 aaKnown RBP18.84■□□□□ 0.61
PNKP-225ENST00000636214 PGBD3Q8N328 593 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 TERB1Q8NA31 727 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 MDGA1Q8NFP4 955 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 SPATA20Q8TB22 786 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 KCNV2Q8TDN2 545 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 DDX1Q92499 740 aaKnown RBP18.84■□□□□ 0.61
PNKP-225ENST00000636214 UBXN6Q9BZV1 441 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 DCLK3Q9C098 648 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 DUSP15Q9H1R2 295 aaPredicted RBP18.84■□□□□ 0.61
PNKP-225ENST00000636214 OSER1Q9NX31 292 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 CLIC5Q9NZA1 410 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 A0A0A0MRY4 1105 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 SGK1O00141 431 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 MAP3K13O43283 966 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 TYRP14679 529 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 KCNA4P22459 653 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 EFEMP1Q12805 493 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 LRMPQ12912 555 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 SF3A2Q15428 464 aaKnown RBP18.83■□□□□ 0.6
PNKP-225ENST00000636214 GOLGA7BQ2TAP0 167 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 EMC10Q5UCC4 262 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 SFTPA1Q8IWL2 248 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 ELOA2Q8IYF1 753 aaPredicted RBP18.83■□□□□ 0.6
PNKP-225ENST00000636214 ANKRD52Q8NB46 1076 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 HMGB4Q8WW32 186 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 WBP2Q969T9 261 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 IPO9Q96P70 1041 aaKnown RBP18.83■□□□□ 0.6
PNKP-225ENST00000636214 LRRC4Q9HBW1 653 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 INVSQ9Y283 1065 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 COQ4Q9Y3A0 265 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 USP3Q9Y6I4 520 aa18.83■□□□□ 0.6
PNKP-225ENST00000636214 TCRBV21S2A2A0A5A6 115 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 GDF9O60383 454 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 KIR2DL1P43626 348 aaPredicted RBP18.82■□□□□ 0.6
PNKP-225ENST00000636214 MESP2Q0VG99 397 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 BST2Q10589 180 aaKnown RBP18.82■□□□□ 0.6
PNKP-225ENST00000636214 CYP2U1Q7Z449 544 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 PIGZQ86VD9 579 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 ZNF276Q8N554 614 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 SLC35C1Q96A29 364 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 MARK1Q9P0L2 795 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 MAN1B1Q9UKM7 699 aa18.82■□□□□ 0.6
PNKP-225ENST00000636214 NUP205Q92621 2012 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 GON4LQ3T8J9 2241 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 CACNG3O60359 315 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 STC2O76061 302 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 ZBED1O96006 694 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 HMBSP08397 361 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 VDRP11473 427 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 HOXB2P14652 356 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 CHKAP35790 457 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 FMO5P49326 533 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 DHPSP49366 369 aaPredicted RBP18.81■□□□□ 0.6
PNKP-225ENST00000636214 DGKGP49619 791 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 TKTL1P51854 596 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 YWHAGP61981 247 aaKnown RBP eCLIP18.81■□□□□ 0.6
PNKP-225ENST00000636214 PMS2CLQ68D20 193 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 TMEM92Q6UXU6 159 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 SCD5Q86SK9 330 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 SIX6OS1Q8N1H7 587 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 PHTF2Q8N3S3 785 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 NELFBQ8WX92 580 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 BHMTQ93088 406 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 ZDHHC4Q9NPG8 344 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 OLA1Q9NTK5 396 aaKnown RBP18.81■□□□□ 0.6
PNKP-225ENST00000636214 MARCH2Q9P0N8 246 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 TSPAN16Q9UKR8 245 aa18.81■□□□□ 0.6
PNKP-225ENST00000636214 TPRP12270 2363 aaKnown RBP18.81■□□□□ 0.6
PNKP-225ENST00000636214 ANTXRLA6NF34 631 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 XPO1O14980 1071 aaKnown RBP18.8■□□□□ 0.6
PNKP-225ENST00000636214 CAVIN2O95810 425 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 CYBBP04839 570 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 NTSR1P30989 418 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 CORO1AP31146 461 aaKnown RBP18.8■□□□□ 0.6
PNKP-225ENST00000636214 TMEM270Q6UE05 265 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 LPCAT2Q7L5N7 544 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 CHPFQ8IZ52 775 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 SMOC1Q9H4F8 434 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 KIAA1257Q9ULG3 409 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 CTNND2Q9UQB3 1225 aa18.8■□□□□ 0.6
PNKP-225ENST00000636214 SLC12A8A0AV02 714 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms