RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 F8W8V4 182 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 M0QX08 132 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 CCP110O43303 1012 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 TSPAN3O60637 253 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ZBED4O75132 1171 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 RECQL4O94761 1208 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 AGFG2O95081 481 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 GOSR1O95249 250 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 TGDSO95455 350 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ITGB1P05556 798 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 APOA4P06727 396 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 THP07101 528 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SLC3A2P08195 630 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 GNAI3P08754 354 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 THEGLP0DJG4 465 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 EEF2P13639 858 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 TSHRP16473 764 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 FDXRP22570 491 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 MGAT1P26572 445 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 MXI1P50539 228 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 PTTG1IPP53801 180 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SLC12A2P55011 1212 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 DRG2P55039 364 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SUMO3P55854 103 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ARL4CP56559 192 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 GNAI1P63096 354 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 MRPS21P82921 87 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SLC25A3Q00325 362 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 IL1RL1Q01638 556 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ZNF543Q08ER8 600 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 FSTL1Q12841 308 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 IFIT5Q13325 482 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ANKRD1Q15327 319 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ASIC2Q16515 512 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 CCDC38Q502W7 563 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 FAM102AQ5T9C2 384 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 UTP14CQ5TAP6 766 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 KAZNQ674X7 775 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 EFCAB12Q6NXP0 572 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 LRRC55Q6ZSA7 311 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 RHOUQ7L0Q8 258 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 PPP1R32Q7Z5V6 425 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ZER1Q7Z7L7 766 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 MICU3Q86XE3 530 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 LRRC71Q8N4P6 559 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ZNF276Q8N554 614 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 OR2C3Q8N628 320 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ESX1Q8N693 406 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 FITM2Q8N6M3 262 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 TRIML1Q8N9V2 468 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 DRAXINQ8NBI3 349 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 USP6NLQ92738 828 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 TNPO1Q92973 898 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SCAMP4Q969E2 229 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 TRIM43Q96BQ3 446 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SPATA17Q96L03 361 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 KLHL32Q96NJ5 620 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 NEK1Q96PY6 1258 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 COLEC11Q9BWP8 271 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 TXLNGYQ9BZA5 131 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 UNKQ9C0B0 810 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SPON1Q9HCB6 807 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 XAB2Q9HCS7 855 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ITM2CQ9NQX7 267 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 CNNM1Q9NRU3 951 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 GGA3Q9NZ52 723 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 VSX1Q9NZR4 365 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 PTGFRNQ9P2B2 879 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 CLIP2Q9UDT6 1046 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SH3BGRL2Q9UJC5 107 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 SLC13A4Q9UKG4 626 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 ZHX1Q9UKY1 873 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 FZD1Q9UP38 647 aa3.22□□□□□ -1.89
PSPC1-208ENST00000635562 NOSIPQ9Y314 301 aaKnown RBP3.22□□□□□ -1.89
PSPC1-208ENST00000635562 A0A087WWL8 130 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC196A0A1B0GTZ2 297 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC78A2IDD5 438 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CDHR4A6H8M9 788 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC69A6NI79 296 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 A6NLC8 198 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TISP43B9A030 160 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 B9A039 149 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 H0Y626 953 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 LEFTY2O00292 366 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 BTN3A1O00481 513 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MCF2LO15068 1137 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 SOCS5O75159 536 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TBCAO75347 108 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 SLC22A3O75751 556 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 USP1O94782 785 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 SNX4O95219 450 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 NUDT3O95989 172 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CHEK2O96017 543 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TPM3P06753 285 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ADRB2P07550 413 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 HSPA5P11021 654 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CKBP12277 381 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 FCER1AP12319 257 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ATP1A3P13637 1013 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 HK1P19367 917 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms