RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 TMEM260Q9NX78 707 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 SLC39A10Q9ULF5 831 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 TMCO1Q9UM00 188 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 SORCS3Q9UPU3 1222 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
PATJ-216ENST00000635214 SHANK3Q9BYB0 1731 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 SUPT3HB4E1H0 165 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 NFKBIEO00221 500 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 AREL1O15033 823 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 SASH3O75995 380 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 ATP6V1C1P21283 382 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 EPHB2P29323 1055 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 TRAF3Q13114 568 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 KIZQ2M2Z5 673 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 TIMM50Q3ZCQ8 353 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 KCNT1Q5JUK3 1230 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 CACHD1Q5VU97 1274 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 RNF219Q5W0B1 726 aaPredicted RBP9.03□□□□□ -0.96
PATJ-216ENST00000635214 NIPA1Q7RTP0 329 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 TBC1D19Q8N5T2 526 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 AGAP11Q8TF27 550 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 PAFAH2Q99487 392 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 RPAP3Q9H6T3 665 aaPredicted RBP9.03□□□□□ -0.96
PATJ-216ENST00000635214 ENOPH1Q9UHY7 261 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 ITM2BQ9Y287 266 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 V9GYQ6 96 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 COL5A3P25940 1745 aaPredicted RBP9.03□□□□□ -0.96
PATJ-216ENST00000635214 A0A087X0T9 212 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 FAM228BP0C875 321 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 ME2P23368 584 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 RRM2P31350 389 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 PRKAA2P54646 552 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 NME3Q13232 169 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 SMAD1Q15797 465 aaKnown RBP9.03□□□□□ -0.96
PATJ-216ENST00000635214 BOLA3Q53S33 107 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 SLC45A4Q5BKX6 768 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 THEMIS2Q5TEJ8 643 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 SNRNP48Q6IEG0 339 aaKnown RBP9.03□□□□□ -0.96
PATJ-216ENST00000635214 UBR3Q6ZT12 1888 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 RAB42Q8N4Z0 105 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 DHRSXQ8N5I4 330 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 ASZ1Q8WWH4 475 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 FOPNLQ96NB1 174 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 TEX13BQ9BXU2 312 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 RMND5AQ9H871 391 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 CD274Q9NZQ7 290 aa9.03□□□□□ -0.96
PATJ-216ENST00000635214 GNRH1P01148 92 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 GLI1P08151 1106 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 ALOX5P09917 674 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 NMT1P30419 496 aaKnown RBP9.02□□□□□ -0.96
PATJ-216ENST00000635214 GTF2H1P32780 548 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 PTENP60484 403 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 MCL1Q07820 350 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 ITGADQ13349 1161 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 RGMBQ6NW40 437 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 ZNF554Q86TJ5 538 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 FAM83AQ86UY5 434 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 CD302Q8IX05 232 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 CENPLQ8N0S6 344 aaPredicted RBP9.02□□□□□ -0.96
PATJ-216ENST00000635214 FBXO36Q8NEA4 188 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 OR6Y1Q8NGX8 325 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 TATDN2Q93075 761 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 SH3KBP1Q96B97 665 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 LENG1Q96BZ8 264 aaPredicted RBP9.02□□□□□ -0.96
PATJ-216ENST00000635214 OXNAD1Q96HP4 312 aaPredicted RBP9.02□□□□□ -0.96
PATJ-216ENST00000635214 MED15Q96RN5 788 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 AFF4Q9UHB7 1163 aaKnown RBP9.02□□□□□ -0.96
PATJ-216ENST00000635214 TMCC3Q9ULS5 477 aa9.02□□□□□ -0.96
PATJ-216ENST00000635214 UBR2Q8IWV8 1755 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 MYMKA6NI61 221 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 PRPF4O43172 522 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■■■□ 21.3
PATJ-216ENST00000635214 BNIP3LO60238 219 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 RAG1P15918 1043 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 MTTPP55157 894 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ZNF844Q08AG5 666 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 SNAPC2Q13487 334 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ITGA9Q13797 1035 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 NFYCQ13952 458 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 CAPSLQ8WWF8 208 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 RNFT2Q96EX2 444 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 GCNAQ96QF7 691 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ARHGEF3Q9NR81 526 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 NCKIPSDQ9NZQ3 722 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 NAALADL1Q9UQQ1 740 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 PIPSLA2A3N6 862 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 SNAP23O00161 211 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 TPD52L2O43399 206 aaKnown RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 LDLRP01130 860 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ALOX12P18054 663 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 SNAP25P60880 206 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 IL5RAQ01344 420 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 TRAF2Q12933 501 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ITGB3BPQ13352 177 aaPredicted RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 MAPK11Q15759 364 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 FAM98BQ52LJ0 330 aaKnown RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 TMC3Q7Z5M5 1100 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ATP8B4Q8TF62 1192 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms