RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 BYSLQ13895 437 aaKnown RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 STX1AQ16623 288 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 HSF5Q4G112 596 aaPredicted RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 HECTD3Q5T447 861 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 SCARA5Q6ZMJ2 495 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 KIAA1958Q8N8K9 716 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 FBXL13Q8NEE6 735 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 SCAMP5Q8TAC9 235 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 TAS1R2Q8TE23 839 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 SLC35C1Q96A29 364 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 ELMO3Q96BJ8 720 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 NACA2Q9H009 215 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 MBD1Q9UIS9 605 aaPredicted RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 ZMIZ1Q9ULJ6 1067 aa16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 ATXN2Q99700 1313 aaKnown RBP16.43■□□□□ 0.22
SNRNP48-203ENST00000634363 PI4KAP42356 2102 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 USP24Q9UPU5 2620 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 A0A0A0MRY4 1105 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 TNFRSF10BO14763 440 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 ADAM23O75077 832 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 CFIP05156 583 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 CSRP1P21291 193 aaKnown RBP16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 WASP42768 502 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 SYT12Q8IV01 421 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 FAM114A1Q8IWE2 563 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 ZNF513Q8N8E2 541 aaPredicted RBP16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 PDZD8Q8NEN9 1154 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 ERLEC1Q96DZ1 483 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 SCNM1Q9BWG6 230 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 SMYD3Q9H7B4 428 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 CCSER2Q9H7U1 834 aa16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.42■□□□□ 0.228e-8■■■■■ 44.9
SNRNP48-203ENST00000634363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNRNP48-203ENST00000634363 GON4LQ3T8J9 2241 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 TNRC6BQ9UPQ9 1833 aaKnown RBP16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 ENGP17813 658 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 ITPKAP23677 461 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 MARSP56192 900 aaKnown RBP16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 CETN1Q12798 172 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 MAP7D1Q3KQU3 841 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 LYSMD4Q5XG99 296 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 SPOPLQ6IQ16 392 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 KIAA1211LQ6NV74 962 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 NUDT18Q6ZVK8 323 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 TMEM25Q86YD3 366 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 BBS7Q8IWZ6 715 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 ADAM33Q9BZ11 813 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 NIF3L1Q9GZT8 377 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 SLC32A1Q9H598 525 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 FSCN3Q9NQT6 498 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 RAB20Q9NX57 234 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 DEC1Q9P2X7 70 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 EVLQ9UI08 416 aaPredicted RBP16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 ATP8B3O60423 1300 aa16.41■□□□□ 0.22
SNRNP48-203ENST00000634363 ASCC3Q8N3C0 2202 aaKnown RBP16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 TULP3O75386 442 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 TRIM21P19474 475 aaKnown RBP16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 FMO5P49326 533 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 SLC5A3P53794 718 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 ATXN3P54252 364 aaPredicted RBP16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 RPL6Q02878 288 aaKnown RBP16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 PREPLQ4J6C6 727 aaPredicted RBP16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 ACOT1Q86TX2 421 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 FAM35AQ86V20 835 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 TRIM59Q8IWR1 403 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 OVCA2Q8WZ82 227 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 WBP2Q969T9 261 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 OTUB2Q96DC9 234 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 MED15Q96RN5 788 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 GTPBP2Q9BX10 602 aaKnown RBP16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 THAP9Q9H5L6 903 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 SPHK2Q9NRA0 654 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 GMIPQ9P107 970 aa16.4■□□□□ 0.22
SNRNP48-203ENST00000634363 TRIM24O15164 1050 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 ZBTB24O43167 697 aaPredicted RBP16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 AP1G2O75843 785 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 AFPP02771 609 aaKnown RBP16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 ASPAP45381 313 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 PAQR9Q6ZVX9 377 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 TRMT11Q7Z4G4 463 aaKnown RBP16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 PHTF2Q8N3S3 785 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 TNIP3Q96KP6 325 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 DMAP1Q9NPF5 467 aaPredicted RBP16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 PILRBQ9UKJ0 227 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 WASF3Q9UPY6 502 aa16.39■□□□□ 0.21
SNRNP48-203ENST00000634363 COQ4Q9Y3A0 265 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms