RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 STXBP5Q5T5C0 1151 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 GPR158Q5T848 1215 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 PM20D1Q6GTS8 502 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 BHLHA9Q7RTU4 235 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 ULBP1Q9BZM6 244 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 FBXO44Q9H4M3 255 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 CYLDQ9NQC7 956 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 CHORDC1Q9UHD1 332 aaPredicted RBP19.56■□□□□ 0.72
PNKP-224ENST00000631020 SCML2Q9UQR0 700 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 NCANO14594 1321 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 KIF26AQ9ULI4 1882 aaPredicted RBP19.56■□□□□ 0.72
PNKP-224ENST00000631020 SHISA7A6NL88 538 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 PAPSS1O43252 624 aaPredicted RBP19.56■□□□□ 0.72
PNKP-224ENST00000631020 ZBED1O96006 694 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 ACADSBP45954 432 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 CENPCQ03188 943 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 CCDC186Q7Z3E2 898 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 ERICH1Q86X53 443 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 DNAAF5Q86Y56 855 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 FBXO32Q969P5 355 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.56■□□□□ 0.72
PNKP-224ENST00000631020 MIS12Q9H081 205 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 SEMA4AQ9H3S1 761 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 NHEJ1Q9H9Q4 299 aaPredicted RBP19.56■□□□□ 0.72
PNKP-224ENST00000631020 GMIPQ9P107 970 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 UXTQ9UBK9 157 aaPredicted RBP19.56■□□□□ 0.72
PNKP-224ENST00000631020 SSU72P8A0A1W2PR75 194 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 GFRA3O60609 400 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 MMP8P22894 467 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 GABRB2P47870 512 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 PTP4A2Q12974 167 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 ARHGAP29Q52LW3 1261 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 ACAD10Q6JQN1 1059 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 SCD5Q86SK9 330 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 PHF13Q86YI8 300 aaPredicted RBP19.55■□□□□ 0.72
PNKP-224ENST00000631020 YAF2Q8IY57 180 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 SCML4Q8N228 414 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 RSPRY1Q96DX4 576 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 NOX5Q96PH1 765 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 IER2Q9BTL4 223 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 NMUR1Q9HB89 426 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 CNGB3Q9NQW8 809 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 EHD2Q9NZN4 543 aa19.55■□□□□ 0.72
PNKP-224ENST00000631020 MTF2Q9Y483 593 aaPredicted RBP19.55■□□□□ 0.72
PNKP-224ENST00000631020 TMCO5BA8MYB1 307 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 DPYSL4O14531 572 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 ZDHHC11BP0C7U3 371 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 GZMAP12544 262 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 CD72P21854 359 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 TARSP26639 723 aaKnown RBP19.54■□□□□ 0.72
PNKP-224ENST00000631020 DAOAP59103 153 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 MMS22LQ6ZRQ5 1243 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 TMEM139Q8IV31 216 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 ZNF687Q8N1G0 1237 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 SIX6OS1Q8N1H7 587 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 NKD2Q969F2 451 aaPredicted RBP19.54■□□□□ 0.72
PNKP-224ENST00000631020 PIWIL1Q96J94 861 aaKnown RBP19.54■□□□□ 0.72
PNKP-224ENST00000631020 PDLIM2Q96JY6 352 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 SLITRK1Q96PX8 696 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 OSER1Q9NX31 292 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 FBXO4Q9UKT5 387 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 NENFQ9UMX5 172 aa19.54■□□□□ 0.72
PNKP-224ENST00000631020 RIF1Q5UIP0 2472 aaKnown RBP19.54■□□□□ 0.72
PNKP-224ENST00000631020 ZNF840PA6NDX5 716 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 PRR23AA6NEV1 266 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 YJEFN3A6XGL0 299 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 E7ENQ6 273 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 NSFP46459 744 aaKnown RBP19.53■□□□□ 0.72
PNKP-224ENST00000631020 CYP4F8P98187 520 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 GFPT1Q06210 699 aaPredicted RBP19.53■□□□□ 0.72
PNKP-224ENST00000631020 ZNF528Q3MIS6 628 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 ZC3H14Q6PJT7 736 aaKnown RBP19.53■□□□□ 0.72
PNKP-224ENST00000631020 MAMSTRQ6ZN01 415 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 MON1BQ7L1V2 547 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 CMTM8Q8IZV2 173 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 CELF5Q8N6W0 485 aaKnown RBP19.53■□□□□ 0.72
PNKP-224ENST00000631020 CSGALNACT1Q8TDX6 532 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 C18orf8Q96DM3 657 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 SLC46A2Q9BY10 475 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 C8orf33Q9H7E9 229 aaPredicted RBP19.53■□□□□ 0.72
PNKP-224ENST00000631020 NAGPAQ9UK23 515 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 PIAS3Q9Y6X2 628 aa19.53■□□□□ 0.72
PNKP-224ENST00000631020 A0A1W2PQH9 124 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 FBXO21O94952 628 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 FTLP02792 175 aaPredicted RBP19.52■□□□□ 0.72
PNKP-224ENST00000631020 GSDMDP57764 484 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 FZD5Q13467 585 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 SNX30Q5VWJ9 437 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 FAM183BPQ6ZVS7 135 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 VPS36Q86VN1 386 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 MON1AQ86VX9 555 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 XYLT1Q86Y38 959 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 BPIFB1Q8TDL5 484 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 OVCA2Q8WZ82 227 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 CCDC42Q96M95 316 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 C11orf70Q9BRQ4 267 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 ISCUQ9H1K1 167 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 SYNCQ9H7C4 482 aa19.52■□□□□ 0.72
PNKP-224ENST00000631020 KIF9Q9HAQ2 790 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms